Nematolebias whitei (Rio pearlfish): 119423935
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Entry
119423935 CDS
T08042
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119423935 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nwh03310
]
119423935 (raraa)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119423935 (raraa)
Nuclear receptors [BR:
nwh03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
119423935 (raraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119423935
NCBI-ProteinID:
XP_037547293
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Position
17:complement(22226510..22337785)
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AA seq
455 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHKETFPSLCQLGKYTTTNSSERRVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDVLQEPLLEALK
LYVRRRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGSRPNGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgagagtgtggacgttgtgggactgaatcccagcccgaacccgtttctaatg
atggattattacaaccagagcagaggatgtttgatcccagagaaaggactggtgcccgga
gcgccccatccctacagcacgtccatcaggaaccagcactggaacggatccaatcactca
atagaaacccagagtaccagttcagaggagatagtgccaagcccgccctcgcctcccccg
ccaccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggcttctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgagagaagaactgcatcatcaacaaagtcacccgcaatcgctgc
cagtactgtcggctacagaagtgcctggaagtcgggatgtctaaagagtctgtgaggaac
gaccggaacaaaaagaagaaggatgagaagaagcaggagtgcacggagagctacgtgctg
agtccagacacagagcagatgattgacagggttcgcaaggcacacaaggaaaccttcccc
tccctctgccagctgggcaaatacactacgactaacagctcagaaaggcgtgtgtccttg
gacgttgacctgtgggacaagttcagcgagctctccaccaagtgcatcataaagacggtg
gagttcgcaaagcagctgccgggtttcacaacgctcaccatcgctgaccagatcacgctg
ctcaaagctgcctgtctggatattctgatactgcggatctgtacgcgctacacgccagag
caggacaccatgaccttctcagatggactcacgctaaacagaacccagatgcacaacgct
ggcttcggtcccctcacagacctggtgtttgcctttgccaaccagctccttcctttggag
atggatgatgcagagacggggctgcttagcgccatctgcttgctgtgcggagatcgacag
gacttggaagaagcggacaaggtggatgtcctgcaggagccccttctggaggcgctgaag
ctttacgtgagacggaggcggcctcacaaacctcatatgtttcccaagatgctgatgaag
ataacggacctgagaagcatcagtgctaaaggagctgaacgcgttatcacgctgaagatg
gagatccccggctccatgccacctctcatccaggagatgttggagaactcagagggtctg
gaaagcggggctgcaggcagcaggcccaacggcgcccccccaggaagctgcagtcccagt
ctgtcccccagctcggcccaaagcagtccagccacacaatcgccgtag
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