Oncorhynchus gorbuscha (pink salmon): 124048315
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Entry
124048315 CDS
T07892
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124048315 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124048315 (raraa)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124048315 (raraa)
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
124048315 (raraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124048315
NCBI-ProteinID:
XP_046224928
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Position
LG11:complement(22696249..22955614)
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AA seq
457 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVSGVPHPYSSSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKPECTESYVL
STETEQMINRVSKAHKETFPSLCQLGKYTTSNSSERRVALDVNLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQADKVDVLQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGATGSRTSGALPGSCSPSLSPSSAQSSPSPTTQSP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagtgtggacgtcgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgtttgatcccggagaaaggacttgtgtctgga
gtgccccatccctacagctcgtccatcagaaaccaacactggaacggctcaaatcactct
atagagacgcagagtaccagctcagaggagatagtgccgagcccgccgtcgccccctcct
cccccgcgggtctacaagccctgctttgtgtgccaagacaagtcctcaggataccactat
ggagtcagcgcctgtgaaggctgcaagggcttctttcggaggagcatccagaagaacatg
gtgtacacgtgtcaccgggagaagaactgcatcatcaacaaggtcaccaggaaccgctgc
cagtactgccgcctgcagaagtgcctggaagtgggcatgtccaaggagtcggtgaggaac
gaccggaacaagaagaagaaggatgagaagaagccggagtgcactgagagctacgtgctg
agcactgagacggagcagatgatcaacagggtcagcaaggcgcataaggagaccttccct
tccctctgccagctcggcaaatacactacgagtaacagctcggagcggcgtgtggctttg
gacgtgaacctgtgggacaaattcagtgagctgtccaccaagtgtatcatcaagacggtg
gagttcgccaagcagcttcctggcttcaccacgctcaccatcgctgaccagatcaccctg
ctcaaggccgcctgtctggacatactgattctgcggatctgcacgcgctacacaccggag
caggacaccatgacgttctcggacggcctgacgctaaaccggacccagatgcacaatgcc
ggcttcggaccgctcaccgacctggtgttcgccttcgccaaccagctcctccccctggag
atggacgacgctgagactgggctgctcagcgccatctgtctgctgtgtggagatcggcag
gacctggagcaggctgacaaggtggacgtactacaggagcccctactggaggctctgaag
atctacgtgaggaagaggaggcctcacaaaccacacatgtttcccaagatgctgatgaag
atcaccgacctgaggagcatcagtgccaaaggagccgagcgtgtcatcaccctgaagatg
gagatcccgggctccatgccccctctcatccaggagatgctagagaattctgagggtctg
gagagtggggccacaggctcccggaccagtggggccctcccaggcagctgcagccccagc
ctatccccaagttccgcccaaagcagccccagccccaccacgcagtcaccgtag
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