Oncorhynchus keta (chum salmon): 118357613
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Entry
118357613 CDS
T09424
Name
(RefSeq) retinoic acid receptor alpha-A-like isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118357613
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118357613
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118357613
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
118357613
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118357613
NCBI-ProteinID:
XP_035590795
EnsemblRapid:
ENSOKEG00005006586
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Position
24:complement(45776802..46015259)
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AA seq
495 aa
AA seq
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MYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHHYSTSIRNQHWNGSNHSI
ETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKSMV
YTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESPRTSSKGGMVLGPQPPPPPLETGR
GQTGGPGADRAAPPAVRNDRNKKKKDEKKQESTESYVLSTETEQMINRVSKAHKETFPSL
CQLGKYTTSNSSERRVALDVDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLK
AACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMD
DAETGLLSAICLLCGDRQDLEQADKVDVLQEPLLEALKIYVRKRRPHKPHMFPKMLMKIT
DLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLESGATGTRTSGAPPGSCSPSLS
PSSAQSSPSPTTQSP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagagtgtggacgtcgtgggactgaatcccagcccgaacccgtttttaatgatg
gattactacaaccagagcagaggatgtttgatcccagagaaaggacttgtgcccggagcg
cctcatcactacagcacgtccatcagaaatcaacactggaacggctcgaatcactcgata
gagacacagagtaccagctcagaggagatagtgccaagcccgccatcgccgcctcctccc
ccgagggtctacaagccctgcttcgtgtgccaggacaaatcctcaggataccactatgga
gtcagtgcctgcgaaggttgcaagggcttctttcggaggagcatccagaagagcatggtg
tacacatgtcaccgggagaagaactgcatcatcaacaaggtcaccaggaaccgctgccag
tactgcaggctgcagaaatgcttggaagtgggcatgtccaaggagtctcctcgcaccagc
tccaaaggcgggatggtgttgggcccccagccgccgcccccaccattggagaccgggagg
ggacagactggggggccaggggcggacagggcagctcccccggcggtgaggaacgaccgg
aacaagaagaagaaggatgagaagaagcaggagagcacagagagctacgtgctgagcact
gagacggagcagatgatcaacagggtcagcaaggcgcataaggagaccttcccttcgctc
tgccagctgggcaaatacactacgagtaacagctcggagaggcgtgtggctctggacgtg
gacctgtgggacaagttcagtgagctgtccaccaagtgtatcatcaagacggtggagttc
gccaagcagcttcctggcttcaccacgctcaccatcgctgaccagatcaccctgctcaag
gccgcctgtctggacatactgattctgcggatctgcacgcgctacacaccggagcaggac
accatgacgttctctgatggcctgacgctaaaccgcacccagatgcacaatgccggcttc
ggaccgctcaccgacctggtgttcgccttcgccaaccagctcctccccctggagatggat
gatgctgagacggggctgctcagcgccatctgtctgctgtgtggagatcggcaggacctg
gagcaggcagacaaggtggacgtactacaggagcccctactggaggctctgaagatctac
gtgaggaagaggaggcctcacaaaccacacatgttcccaaagatgctgatgaaaatcacc
gacctgaggagcatcagcgccaaaggagctgagcgtgtcatcaccctgaagatggagatc
ccgggctccatgccccctctcatccaggagatgctggagaactctgaaggtctggagagc
ggggccacaggcacccggaccagcggagcccccccaggcagctgcagccccagcctgtcc
cccagctccgcccaaagcagccccagccccaccacacagtcgccgtag
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