Oryzias melastigma (Indian medaka): 112153888
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Entry
112153888 CDS
T07439
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112153888 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oml03310
]
112153888 (raraa)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112153888 (raraa)
Nuclear receptors [BR:
oml03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
112153888 (raraa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112153888
NCBI-ProteinID:
XP_024140113
Ensembl:
ENSOMEG00000005084
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Position
LG19:complement(3478553..3775016)
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AA seq
455 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSASIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQETFPSLCQLGKYTTSNSSERRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDVLQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAVGGRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgagagcgtggacgttgtgggactgaaccccagcccgaaccccttcttaatg
atggattactacaaccagagcagaggatgtttgatcccagagaaaggactggtgcccggg
gcgcctcatccctacagcgcgtccatcaggaaccagcactggaacggctccaaccactcg
atagagacccagagcaccagctcagaggagatagtgccaagcccgccctcgccgcccccg
ccgccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggcttctttcggagaagcatccagaaaaacatg
gtgtacacttgtcaccgagagaagaactgcatcatcaacaaagtcacccgcaaccgctgc
cagtactgtcggttacagaagtgcctggaagtcggcatgtcgaaggaatcggtgaggaat
gacaggaacaagaagaagaaggatgagaagaagcaggagtgcacggagagctacgtgctg
agtcccgacacggagcagatgatcgacagggttcgcaaggcacaccaggaaactttccct
tctctctgccagctgggcaaatacactacgtctaacagctcagaacgccgcgtgtccttg
gacattgacctgtgggacaagttcagcgagctctccaccaagtgcatcataaagacggtg
gagtttgccaagcagctgcccggcttcaccacgctcaccatcgctgaccagatcactctg
ctcaaagccgcctgtctggacattctgattctgcggatctgcacacgctacacaccggaa
caggacaccatgaccttctccgacggactcacgttaaaccggacccagatgcacaacgcc
ggcttcggccccctcacagacctggtttttgctttcgccaaccagctccttcctctggag
atggacgatgcggagacggggctgctgagcgccatctgcctgctgtgtggagatcggcag
gacttggaagaggcagacaaggtggacgtcctgcaggagccacttctggaggcgctgaag
atttacgtgaggaagaggaggccccacaaaccgcacatgttccccaaaatgctgatgaag
atcaccgacctgagaagcatcagtgctaaaggagccgagcgcgtcatcacgctgaagatg
gagatccccggctccatgccgcctctcatccaggagatgctggagaactcagagggtttg
gaaagcggggcggtagggggccgacccagcggcgccccccctggcagctgcagccccagt
ctgtccccaagctctgcccaaagcagccccgccacgcagtcgccgtag
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