Oncorhynchus mykiss (rainbow trout): 110486146
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Entry
110486146 CDS
T07259
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110486146
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110486146
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110486146
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
110486146
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
SRR1
Motif
Other DBs
NCBI-GeneID:
110486146
NCBI-ProteinID:
XP_036796694
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Position
13:33001356..33230495
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AA seq
461 aa
AA seq
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MAGKGNPCHPPGGPGSAGGPTVSVGGFPMPHYSYFFPHMLGGLSPPTLSGLPVNGYSTPS
PATIETQSTSSEEIVPSPPSPPPPPRIYKPCFVCADKSSGYHYGVSACEGCKGFFRRSIQ
KNMVYTCHREKGCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKEEKKPECTEI
YVLSTETEQMIERVRKAHKETFPSLCQLGKYTTNNSAEHRVALDVNLWDKFSELSTKCII
KTVEFAKHLPGFTTLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQM
HNAGFGPLTDLVFAFAQTLLPLEMDDAETGLLSGICLLCGDRQDLEQADKVDLLQEPLLE
ALKIYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS
EGLEGQGASGGRSSGGGAPPGSCSPSLSPSSARSSPPAPSP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaagggtaacccctgccaccccccgggggggccagggagtgcggggggcccc
actgtctctgtggggggattccccatgcctcactactcctacttcttcccccacatgctg
ggggggctgtcccctcccaccctctccggactgcccgtcaacggatacagcaccccgtcg
ccagccaccatagagacccagagcaccagctcggaagagatagtccccagtcctccctcg
ccgcctcctcccccgcgaatctacaaaccctgcttcgtttgtgcggacaagtcctcggga
taccactacggggtcagcgcctgcgagggctgcaagggtttcttccggagaagcatccag
aagaacatggtgtacacctgtcaccgagagaaaggctgcatcatcaacaaggtcacccgc
aaccgctgccagtactgccgcctgcagaagtgtttagaagtgggcatgtccaaggagtcg
gtgaggaacgacaggaacaagaagaagaaggaggagaagaagccagagtgtacggagatc
tacgtgctgagtaccgagacggagcagatgatcgaacgcgttcgcaaggcccataaggag
acttttccctcgctctgtcagctgggcaaatacaccacgaataacagtgcagagcaccgc
gtggctctagacgtaaacctatgggataagttcagtgagctgtccactaagtgtatcatc
aagacggtggagtttgccaaacatctgccaggcttcaccaccctcactatcgctgaccag
atcaccctgctcaaggctgcctgtctggacatactgattctgaggatctgcacgcgctac
actccagaccaggacaccatgaccttctcagacgggctgaccctgaacaggacccagatg
cacaacgcaggcttcggcccgctcacagacctggtgttcgccttcgcccagacactcctc
cccctggagatggacgacgccgagaccggcctgctcagcggcatctgtctgctgtgtgga
gaccgccaggatctggagcaggcagacaaggtggacttgctacaggagcccctactggag
gctctgaagatctacgtgaggaagaggaggcctcacaaaccgcacatgttccccaagatg
ctgatgaagatcacggacctcaggagcatcagcgccaagggagcggagcgagtgatcact
ctgaagatggagatcccaggctccatgccccctctcatccaggagatgctggagaactca
gagggtctggagggccagggggccagcgggggccgctccagcggaggaggggccccacca
ggcagctgcagccccagcctgtcccccagttcagctcgcagcagcccccctgcaccctcc
ccttag
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