Oryza sativa japonica (Japanese rice) (RefSeq): 4326459
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Entry
4326459 CDS
T01015
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00600
Sphingolipid metabolism
osa01100
Metabolic pathways
Module
osa_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
4326459
Enzymes [BR:
osa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
4326459
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
NifW
Motif
Other DBs
NCBI-GeneID:
4326459
NCBI-ProteinID:
XP_015621818
UniProt:
Q52RG7
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Position
1:35586..41178
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AA seq
539 aa
AA seq
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MELAMDFALRLRDAANHHLSRYEPLVLLAAPLLALLAARTLHAAAAAVADRGLRTVLLAL
AMTAIKLLPGVSAYINAEKRKVVDQLQSGGTSTKSTLRTELPTVGLSNQVINDLETLKAR
DVNWQGKCSGTVYIAGSESEGHFALINKAYSMFSHTNPLHQDVFKSVAQLEAEVVAMTAA
LLGIKEKSSGGQICGNMTSGGTESILLAVKTSRDYMRTKKGITKPEMIIAESAHSAYDKA
AQYFNIKVRRVPVNKEFLADVKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELASRY
DICLHVDLCLGGFVLPFARKLGYPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNH
EIRKHQFVAVTEWTGGLYVSPTIAGSRPGGLIAGAWAAMTSLGLNGYMENTGHIMEVSKK
IQRGIEDIPGLFVIGKPDMTVVAFGSDSVDIFEVNDIMSSKGWHLNALQRPNSLHICVTL
QHTVIYEEFLKDLKDSVDTVKANPGPISGGRAPIYGAAGKMPDRGMVRELLVEFMDASC
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgccatggattttgcgctccgcctccgcgacgccgccaaccaccacctctcc
cgctacgagcctctcgtgctcctcgccgcgcccctcctcgccctcctcgctgcccgcacc
ctccacgccgccgctgccgccgtcgccgaccgcggtctccgcaccgtcctcctcgctcta
gccatgacagccatcaagttgcttccgggagttagcgcctacatcaacgctgagaagagg
aaggttgttgaccagctgcagtcaggtggcacgtccacaaaaagtactctgcggaccgag
ttgccaactgttgggctttccaaccaagtgataaacgatctcgaaacactgaaagctaga
gatgtaaactggcagggaaaatgctctggcacagtttatattgctgggagtgaatccgaa
ggtcattttgcattgataaacaaggcttactctatgttttcacacaccaacccacttcac
caggacgtattcaagagtgtggcacaattagaggctgaagtagttgcaatgacagctgct
ttgcttggcatcaaagaaaaatcatccggtggacagatttgtggtaatatgacatcgggc
ggaactgaaagcatattattagcagtaaaaacatcacgcgactatatgcgaacaaagaag
ggcattacaaagcctgaaatgataattgccgaatcagcacattctgcatacgataaagct
gctcaatatttcaatattaaagtgcggcgtgtgccagtgaacaaagagtttcttgcagat
gtgaaaggattcaaaaggtgtataaacggaaatacgataatgatggtggggtctgcacca
ggatttcctcatggtttaattgatcctattgaggaacttggggagttggcttcacgatat
gacatttgcttgcatgttgatctctgccttggtggatttgtattgcctttcgctcgtaag
cttgggtaccctattcctccattcgacttctgtgtcaagggagttacatcaatctcaact
gatgttcataagtatggattagccccaaaagggacaagcattgtcctatataaaaatcat
gaaattagaaagcatcaatttgttgctgttactgaatggactggtgggctctatgtttca
cctactattgctggaagtaggcctggtgggttgatagcgggagcttgggctgctatgacg
tctcttggactgaacggttatatggaaaatacaggtcatatcatggaagtgtcgaagaaa
atacaaagagggattgaagatatcccagggttgtttgtgattggaaagccagacatgact
gtcgtggcatttggctcagattcggttgatatatttgaggtgaacgacataatgtcatca
aaaggctggcaccttaatgctctgcagagacccaacagtttacacatttgtgtgacactg
cagcacacggtcatatatgaggaattcctgaaggatctgaaagattcagtggacactgta
aaagcaaatccagggcctattagcggggggcgagctccgatttacggagctgctggcaag
atgccggacagaggcatggtcagggagctgctggtggagttcatggacgcgtcttgctga
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