Paenibacillus beijingensis: VN24_02875
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Entry
VN24_02875 CDS
T03802
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VN24_02875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbj03400
]
VN24_02875
Enzymes [BR:
pbj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VN24_02875
DNA repair and recombination proteins [BR:
pbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VN24_02875
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AJY73767
UniProt:
A0A0D5NFL8
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All DBs
Position
complement(620420..621547)
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AA seq
375 aa
AA seq
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MLKIGSHVSFSDKGLLTAAKEAVSYGSSSFMIYTGAPQNTRRKPVETLYIEEGRELMVQA
GIDEIVVHAPYIINLGSYKEDTYELAVRFLQEEIRRTHAIGVRNIVLHPGAYTEKDAEFG
INRIAEGLNEVLDGVGETDVNIALETMAGKGTEIGRTFEEIAVIMDKVHKNERLTVCMDT
CHMNDAGYDLIGDLDGVLEQFDRIVGLDRVAVVHINDTKNPRGAAKDRHAPVGAGWLGFE
TINAVVHHEALAGRPFILETPWIGKDAKNQRPMYEAEIALLRGDAMDRFGDQFFDGIERL
HHFFGKQDIDPRTFVLSVWDVLKNDAKAKKADPREPMDRLYDLVMEHQVLPDLTEEEINQ
RITGWFAGKQLLVNA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatcggctctcacgtatctttcagcgataaagggctgcttacggcggcgaag
gaggcggtctcatacggctccagctcattcatgatctataccggcgcgccgcaaaatacc
cgccgcaagccggtggaaaccttatatatcgaagaaggccgggaattgatggtacaagcg
ggcatcgacgaaatcgtcgttcacgcgccttatattatcaacctcggttcttataaagaa
gatacctatgaactggcggtccgatttttgcaggaggaaatccgccgcacgcatgcgatc
ggggtacgaaacatcgtgctgcatcccggcgcctatacggaaaaagacgcggagttcggc
attaaccggattgccgaagggcttaacgaggtgctggacggcgtcggcgaaacggacgtg
aacatcgcgctggaaacgatggcgggcaaagggacggaaatcggtcgcaccttcgaagag
attgccgtcattatggacaaggtgcacaaaaacgagcggctgaccgtctgcatggatacg
tgtcacatgaacgacgccggctacgatctgatcggcgacctggacggggtgctcgagcag
ttcgaccggatcgtcggccttgatcgcgtcgcggtcgtccatatcaacgatacgaaaaat
ccgcgcggcgccgccaaagaccgccatgcgccggtaggagcgggctggctcggctttgag
acgatcaacgcggtcgtgcatcacgaagcgctggcaggacggccgttcattctggaaacg
ccgtggatcggcaaagacgctaaaaatcagcgtccgatgtatgaagcggagatcgcgctg
ctgcgcggcgacgcgatggatcggttcggcgatcaattttttgacgggatcgaacgtctg
caccactttttcggaaaacaggacattgacccgcgcacgtttgtgctgtcggtatgggat
gtgcttaaaaacgacgccaaagcgaaaaaagccgacccgcgcgagccgatggaccgcctg
tacgatttggtcatggagcatcaggttcttcccgatctgaccgaggaagaaatcaaccag
cggattaccggctggtttgcaggaaagcagctgctcgttaacgcgtaa
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