Pseudochaenichthys georgianus (South Georgia icefish): 117464386
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Entry
117464386 CDS
T09629
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117464386 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pgeo03310
]
117464386 (raraa)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117464386 (raraa)
Nuclear receptors [BR:
pgeo03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
117464386 (raraa)
BRITE hierarchy
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117464386
NCBI-ProteinID:
XP_033962683
EnsemblRapid:
ENSPGEG00000017944
LinkDB
All DBs
Position
19:22923693..23015792
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AA seq
455 aa
AA seq
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MMYESVDVVGLTPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDDKKPECMEIYVL
SPETERMIERVRKAHKETFPSLCQLGKYTTSNSSERRVSLDVNLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQAEKVDVLQEPLLEALK
IYVRRRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESAAASSRASGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagcgtggacgttgtgggactgactcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgcttgatcccggagaaaggactggtgcccgga
gcgccccatccgtacagcacgtccatcaggaaccagcactggaacggctccaatcactcg
atagagacccagagtaccagctcagaagagatagtgccaagcccgccctcgcctccgccg
ccgccccgcatctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggcttcttccggagaagcatccagaagaacatg
gtgtacacgtgtcaccgggagaagaactgcatcatcaacaaagtcacccgcaaccgctgc
cagtactgtcggctgcagaagtgcctggaagtcgggatgtcgaaggagtcagtgaggaac
gatcggaacaaaaagaagaaggatgacaagaagccggagtgcatggagatctacgtgctg
agtcctgaaacggagaggatgatcgaacgggttcgaaaggcacacaaggaaacgtttccc
tccctgtgccagctgggcaaatacactacgagtaacagctcagaacgacgtgtatctctg
gacgtaaacctgtgggacaagttcagtgaactgtccaccaagtgcatcataaagacggtg
gagtttgctaagcagctgcccggcttcacaacgctcaccatcgccgaccagatcactctg
ctaaaggccgcctgtctggacatcctgatactccggatctgtacgcgctacacaccagag
caggacaccatgactttctcagatggactcacgctaaatcgaacccagatgcacaacgcc
ggtttcggccctctcaccgacctggtttttgcctttgccaaccagctccttcctctggag
atggacgacgcagagacggggctgctcagcgccatctgtttgctctgtggagatcgtcag
gacttggaacaggcagagaaggtggacgtcctgcaggagcctctactggaggcgttaaag
atttacgtaaggaggaggaggccccacaaaccacacatgttccccaagatgctgatgaag
atcaccgatctgaggagcatcagcgctaaaggagccgagcgagtcatcaccctgaagatg
gagatccccggctccatgccccccctcatccaggagatgctggagaactcggaaggtctg
gagagcgcggcggcaagcagccgggcgagcggcgccccccccggctcctgcagccccagc
ctgtcccccagctcggcccaaagcagtcccgccacacaatcgccgtag
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