Pangasianodon hypophthalmus (striped catfish): 113539459
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Entry
113539459 CDS
T05759
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04260
Cardiac muscle contraction
phyp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113539459
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
113539459
04261 Adrenergic signaling in cardiomyocytes
113539459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113539459
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113539459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Cache_3-Cache_2
CobT_C
Motif
Other DBs
NCBI-GeneID:
113539459
NCBI-ProteinID:
XP_026791002
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MRRLRSALELRVRPVLFWLALCSAAAAAARGSQHGIPLGVVKLWASAFGGEIKSIATKYS
GSQLLQKKCKEYERTIRMEEADGAKLVQSISEKMAEMFRSKAQAARRLVEAAEEAHLQHE
ENPDLQYEYFNAVLINEVDEDGNSVELGGEFILEPNDHFNNLSVNLSLSVVQVPTNMYNK
DPDIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVISFDC
RNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQEI
HYVEPCLNGTLVQADKTNKDHFQAHLDRLFAKGIGLLGDALTEAFTVLNEFNQAGRGSVC
SRAIMLVTDGATEMYDDVFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFSQI
STLADVQENVIRYLHVMSRPKVIDHEHDTVWTEAYVDQALAQAHKLSARNGPNPMTTVAM
PVFSTKNETKNQGILLGVVGIDIPIQDLMKTVPKHKLGIHGYAFAVTNNGYILMHPDLRH
LYQDDQKRRKAHYSSVDLSEVEWEDTDNYLRNAMVNRKTGTFSMEVKRTVDRGKRVLSMH
NDYYFTDISGTPYSVGVALSRGHGKHFFKGNVSLETGLRDLDQPGVALADEWTYCNTDEH
HEHRYLTQVQAIKLYLTGRKPHLKCDRELIQQVLFDAVITAPLKAYWTGLALNKSENPDK
GVEIAFLGTRTGLSRTNLFVVPDQLTNQDLLRAEDKEGIFNADHFPLWYKRAAEQVPGTF
VYSIPFSAAQDNKSVVLASTAIQLLDERKSPIVAAVGIQMKLEFFQRKFWTASRQCNALD
GKCSISCDNEDIKCYLIDNNGFVLVSEDYSQTGLFFGEVEGAVMNKLLLMGSFKRITLYD
YQALCKEYVGSSDSARTLLNLRTFVIQQIPSSNLFMVVVENKCDCSSTPPVTMEPIEIFY
NETLKCETLKFQKDRKRPDSCHPFHPEENAMECGSAMTLSPTLAAALIPLLIFLISR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggctgcggagcgctctggagttgcgcgtgcgtccggtgctgttttggctcgcg
ctgtgctcggcggcggcggcggcggcgcgcgggtcacagcacggcatcccgctcggagta
gttaaactgtgggcttcagcattcggtggtgaaatcaaatccatcgccactaaatactcc
ggttcacaactactgcagaagaaatgtaaggagtatgagcgcacaattcggatggaggag
gctgacggagccaagctggtgcagagcatctctgagaaaatggctgaaatgttccgcagc
aaagcgcaagctgcacggaggctggtggaggcggcggaggaggcgcacttacagcatgag
gagaaccccgacctgcagtacgagtactttaatgctgtcctgataaacgaagtggatgag
gatgggaacagcgtggagttgggaggagaatttatcctggagccaaacgatcactttaac
aacctgtcagttaacctgagtctgagcgtggtgcaggtccccaccaacatgtacaacaaa
gatcctgatatagtaaacggtgtgtactggtctgaggctctgaataaagtgtttgtggat
aacttcgagaaggacccctcactcatctggcagtattttggaagtgctaaaggttttttc
agacaatacccaggtgtgaaatggcatcctgatgaacacggcgtcatctcattcgactgc
cgcaacagaaaatggtacatccaggcagccacgtctccgaaggacgtggtgattctggtg
gacgtgagtggcagtatgaagggtctgcggctcaccatcgcccggcagaccgtctcctcc
atcctggacacgctgggagacgacgacttcttcaacatcatcgcttacaatcaggagatt
cattacgtggaaccgtgtctgaatggaactctggtgcaggccgacaaaaccaataaagat
catttccaagctcatctggaccggctgtttgcgaaaggcatcgggctgctgggagacgct
ctgactgaagctttcacggttctcaatgagtttaaccaagcaggccgtggaagtgtgtgc
agtcgggccatcatgctggtgacggatggagccaccgaaatgtatgacgatgtttttgcc
aagtacaactggcccgagcggaaggtgcgcattttcccctatctgattggacgagagtca
gccttcgcagataaccttaaatggatggcatgcgctaacaaaggctatttcagtcagatc
tccaccctggctgacgttcaggagaacgttataagatatctgcacgtcatgagccgccca
aaagtcatcgaccacgagcacgacacggtgtggactgaggcctacgtggaccaagctctc
gctcaggctcataagctttctgcacgcaacggaccaaatcccatgaccacggtggccatg
cctgtcttcagcaccaagaatgagacgaaaaatcaaggcatcctcctgggtgtagtggga
atagacattcccattcaggacctgatgaagactgtcccgaaacacaagctgggaattcac
ggttatgcgtttgctgttaccaataacggctacatcctcatgcatccagacctccgacat
ctgtaccaggacgatcagaagagacggaaggcccattacagcagtgttgatctgtctgag
gtggagtgggaagacactgacaattatctcaggaacgccatggtgaacagaaaaacaggc
accttctccatggaggtaaagaggacggtggatagagggaaacgtgttctgtcaatgcac
aatgattactacttcaccgacatcagcggaactccatacagtgttggagtggctttgtct
cgagggcatggaaaacacttctttaagggaaatgtttcactggaaacgggtctgcgtgat
ctggatcagccgggtgtggctctggcagatgaatggacgtactgcaacaccgacgagcat
cacgagcatcgctacctgacgcaggttcaggccatcaaactctacctgaccggccgcaaa
ccgcacctcaagtgtgacagggagctgatccagcaggttctgttcgacgccgtgatcacc
gctccactcaaggcctactggaccggcctcgctctcaacaagtcagagaatcctgataaa
ggagtggagattgctttcctcggcactcgtactggtctctccagaaccaacctgtttgtc
gtcccggatcaactgaccaatcaggatctgctgagggcagaggataaggagggcatcttt
aacgcggatcattttcccctgtggtataagagagcggctgagcaagttcctggcaccttc
gtctactccattccctttagtgcagcacaggataataagagtgtggtgttagccagcact
gctatccagctcctggatgagaggaagtctcctatagtggctgctgtcgggattcaaatg
aaactggaattctttcagaggaagttttggacagccagccgacagtgtaacgctctggat
gggaaatgcagcatcagctgtgacaatgaggatattaaatgttacctcattgataacaac
ggcttcgttctggtgtctgaggattattctcagacggggctcttcttcggagaggtggag
ggagccgtcatgaacaaactgctcctcatgggttcttttaaaaggatcacgctgtatgat
tatcaggctctgtgtaaggagtacgtaggcagcagtgacagcgcacgcactttactgaac
ctcaggacgtttgtcattcagcagatccccagcagtaacctctttatggttgttgtggag
aacaagtgtgactgtagctccacccctccagttaccatggagccaatcgagatcttctac
aacgaaactcttaagtgtgagacactgaagtttcagaaggaccgcaaacgtcctgactcc
tgtcacccctttcatcctgaggaaaacgccatggagtgcggctcagccatgaccctttct
cccacgctagctgccgctttgattcccctcctgatcttcctcatttccaggtga
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