Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_03060
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Entry
A4R40_03060 CDS
T05478
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4R40_03060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plum03019
]
A4R40_03060
Messenger RNA biogenesis [BR:
plum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A4R40_03060
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AWK40571
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All DBs
Position
705910..706440
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESPEQAMYRELYEEVGL
GRKDVRVLASTRNWLRYKLPKRLVRWDTRPVCIGQKQRWFLLQLLCNEEDINVQHSNTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMPMQESVSLPRSSYSYRRKRS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgtaggaattgtaatttgtaatcggcaaggc
caggttttgtgggcccggcgttatgggcagcattcctggcaatttcctcaagggggaatt
aatccgggggaatcaccagaacaggctatgtaccgggaactgtatgaagaagtggggtta
ggtcggaaagatgtacgcgttctggcctctactcgtaattggttacgttacaaattaccc
aagcgtttggtgcgttgggatacacgacctgtctgtattggtcaaaagcagcgatggttt
ttattacaactgctctgtaatgaagaagatattaatgtgcaacacagtaataccccggag
ttcgatggttggcgttgggtcagctattggtatcctgttcggcaggtagtctcttttaag
cgtgatgtttatcggcgcgtgatgaaagagtttgcttcggttgtaatgccaatgcaggaa
agcgtatctctgccacgttcttcgtattcttaccgtcgtaaaagaagttag
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