Poecilia mexicana (shortfin molly): 106921869
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Entry
106921869 CDS
T08022
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
106921869 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106921869 (rag1)
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106921869 (rag1)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106921869 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
TRAF3_RING
zf-RING_10
U-box
zf-C3HC4_4
zf-RAG1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
106921869
NCBI-ProteinID:
XP_014849343
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MAGESPETDGPRSLMPAELQHPHSKYSQWKFKLFRVKSMEKAPLPSETQTKIGTSLGISP
PTAPNIEADHGGGLASVMKLCLGGKSKENVEGAGKRVDMKLQEMDTHMNHLRCLCRICGM
VLRKVKGPVHDVHGDLDDASKCVLRKMGCKFTSWPDILLKVFKVDVTEDAESIHPLSFCH
RCWLAAIRGGGVCSFTRTKVPEWKPHASHCYLCSPKKSSFQRTGRKRRKVVPKVQSLAKR
AKWDHGDTIAVGEKRALRPFGDRHSPVVRAWKKNGIQREQWVKNITHCQNDHLNTKLIAE
KLPADFIISFTCLVCDHLLCDPVQSPCGHLFCRSCIIKFTHVLGPHCPSCNLSCAPDDLT
PPAKTFLSTLYSLPLLCPCEGCGEHVQLGLFKAHCLNHEFEPGTNKHSSHFQSYLLTNKG
GRPRQHLLSLTRRAQKHRLKDLKNQVKVFADKEEGGDLKSVCLTLFLLALRSGNEHRQAD
ELEAMMQGRGFGLSPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAEKE
LLPGFHQFEWQPALKNVSESYNVGIINGLSGWTSSLDDSPADTITRRFRYDVALVAALKD
LEEDIMEGLRDTGMEDSACTLGFRVMIKECCDGMGDVSEKHGGGPAVPEKAVRFSFTVMS
VSIQAEDEQEEVTIFTEPKPNSELSCKPLCLMFVDESDHETLTAVLGPIVAERNAMKESR
LILSMGGMPRSFRFHFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEAAQNMVLHSI
TRSHDENLERYEIWRTNPFSESVDELRDRVKGVSAKPFLETQPTLDALHCDIGNATEFYK
IFQDEIGEVYKNPNPSREERRSWRAALDKQLRKKMKLKPVMRMNGNYARRLMTMEATEVV
CELVPSEERREVLRELMRLYLQMKPVWRATCPAKECPDQLCRYSFNSQRFADLLSATFKY
RYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKAFELED
VLKHHWLYTSKYLQKFMEAHKDSAKAFQATIDPEEVQDDEDLTPEITGF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagagcccagagacagacggtcccagatccctcatgcctgctgagctccag
catccccactctaagtattctcagtggaagtttaagctgtttagggtgaaatctatggag
aaggcacctctgccgagtgagacacagaccaagataggaacttcattagggatctcacct
cctactgctccaaatatagaagcagatcatggagggggactggcgagtgttatgaaattg
tgccttgggggaaaaagcaaagaaaatgtggagggcgctggcaagagagtcgatatgaaa
ctgcaggaaatggacacccacatgaaccatctcaggtgcctgtgccgcatctgtggaatg
gtcctgaggaaggtcaaaggacccgtgcatgatgtccatggtgatctggacgacgcaagc
aagtgtgtgctccgcaaaatgggttgcaagtttacgagctggccagacatccttctgaaa
gtattcaaggtcgatgtgacggaggacgcagaatccatccaccctctttccttctgccat
cgctgctggcttgctgccatacgaggaggaggggtctgcagcttcactagaacaaaagtc
ccagagtggaaaccccacgcctcccactgctacctgtgctcccccaaaaagtcatcattt
caaaggactggaagaaagaggaggaaggttgttcctaaagtccagagtttggccaaaaga
gccaagtgggaccacggtgacaccattgctgtcggtgagaagagagcccttagacccttt
ggagaccgccacagccctgtggtgagggcctggaaaaaaaatggtatccagagagaacag
tgggtaaagaatatcacacactgccaaaatgaccacctgaacaccaaactgattgcagag
aagctccctgcggattttatcatttctttcacctgcctggtgtgtgaccacctgctctgt
gatccagttcagtccccctgcgggcatctcttctgccgcagctgcattataaaatttacc
cacgttctgggaccccactgcccttcatgcaacctttcttgtgcccccgatgatctcacc
cctcctgccaaaaccttcttatcaactctctactctctgcctctgctgtgtccctgtgaa
ggttgtggtgagcacgtgcagctaggcttgttcaaggcccactgtctgaaccatgagttt
gagccgggcacaaacaaacactcatctcattttcaaagctacctcctaaccaataaggga
ggacgaccccgccagcacttgctctccttaacccgtcgtgcccagaagcaccgactgaag
gatctgaagaaccaggtgaaggtgtttgcagacaaagaagaaggcggcgatctgaagtct
gtgtgcttgacactgtttctgctcgcgctgagatctgggaatgaacaccggcaggcagat
gagctggaggccatgatgcaaggcagaggctttggattgagtcctgccgtgtgcctggcc
attcgagtcaacacattcctgagctgcagccagtatcataagatgtatcgtacagtcaaa
gctacaagtggccgccagatctttcagcccttgcacaccctcagagctgcagaaaaggaa
ctccttcctggctttcaccagtttgaatggcagccagctctcaaaaatgtgtccgaatct
tataatgtcggcatcataaatgggctgtcaggatggacatcttcgttagatgactcccca
gccgacaccatcacccggcgctttcgctacgatgtggcgcttgttgcagcactgaaggac
cttgaggaggacatcatggagggtctgagagacactgggatggaagatagtgcttgtacc
ttgggctttagggtcatgatcaaggagtgctgcgatggcatgggtgatgttagcgaaaag
catggtggaggaccagctgttcctgagaaggccgtccgcttctctttcactgtcatgtct
gtctctatccaggctgaagatgaacaggaggaggtcacaatttttacagagccaaagccc
aattctgaactatcctgtaagcccctttgccttatgtttgtggatgagtcagaccacgag
actctcactgctgttttggggcccatagttgcagagcgaaatgcgatgaaagagagcagg
ctcattctatctatgggcggcatgccacgctcctttcgtttccacttcaggggcacaggg
tatgacgaaaagatggtgcgtgaaatggagggcctggaagcttcgggatctacgtatatc
tgtactttgtgtgactccactagagcagaggctgctcaaaacatggtgttacactccatc
acccgcagccatgatgagaatctggaacgttatgaaatatggagaaccaaccccttttct
gagtccgtagatgagctacgagacagagtcaagggagtctcggccaagccctttctggag
acccagcccacgctagatgcactgcactgcgacataggcaacgccactgaattctacaaa
atcttccaggatgaaattggagaagtgtacaaaaaccccaaccccagcagagaggaacgg
cgcagctggagggcggccttggataaacagctgaggaagaagatgaagcttaagccagtg
atgaggatgaatgggaactatgcccgaaggttaatgaccatggaggctaccgaggtggtt
tgcgaactggtgccctcagaggagaggagagaggtcctgagggaactcatgaggctctac
ctccagatgaaacctgtgtggcgtgccacctgtccagccaaggagtgccccgaccagctg
tgccgctacagttttaactcccagcgctttgccgacctgctctccgctaccttcaagtac
aggtacaacggaaaaataaccaattacctacacaagaccctggcccacgtgcctgaaatc
atagagagagatggatctattggagcctgggccagcgaggggaacgagtcggcaaacaaa
ctgttcaggcgtttcaggaagatgaatgcgcgtcagtccaaggcctttgagctggaagac
gtgctgaaacaccactggctctacacctcgaagtacttgcagaagttcatggaggctcac
aaagactctgctaaagctttccaggcaacaatagatccagaagaggtccaggatgatgaa
gatttgactccagaaataaccgggttttga
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integrated database retrieval system
