Palaeococcus pacificus: PAP_06235
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Entry
PAP_06235 CDS
T03210
Name
(GenBank) hypothetical protein
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ppac
Palaeococcus pacificus
Pathway
ppac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAP_06235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppac03400
]
PAP_06235
Enzymes [BR:
ppac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PAP_06235
DNA repair and recombination proteins [BR:
ppac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PAP_06235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Amidohydro_1
Ntox5
PA2201_N
Lig_C
ArsD
Motif
Other DBs
NCBI-ProteinID:
AIF69645
UniProt:
A0A075LSD1
LinkDB
All DBs
Position
complement(1124195..1125043)
Genome browser
AA seq
282 aa
AA seq
DB search
MRIKLKKLRFGTAGIPISTPKRSTINGIQKVRELGLDAMELEFVRGINLKPELAKKAKYV
AEKNDIILTAHAPYYINLNAKEKEKVEASKRRIIQSAERLHEAGGYSVVFHAGYYLKQDP
VKVYERIKGELKDVVKTLQDKGIELWIRPELTGKPTQFGNLKELIKLSQEVEMVLPAIDF
AHAHARNKGEYNTIKEWREMLSLMEQELGREALDNMHIHISGINYTEKGEKNHLNLQDSD
MNWEELLKVLKEFKVKGVVISESPNIEGDAVLMKRKYEEIKV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgaggataaagctcaaaaagctaaggtttggaacggctggaatacctatatccacgcca
aagcgctctactattaatgggattcaaaaggttagggagctagggttagacgctatggag
cttgaattcgttagaggaattaatttaaagccagaacttgctaaaaaagccaaatacgtt
gctgaaaagaacgatattattctcacagctcacgctccatactacatcaacttaaacgcc
aaagagaaggaaaaggtcgaggcaagcaagcgcaggataattcagagtgcggagcgctta
catgaagcgggcggctacagcgttgtcttccacgctggttattacctaaagcaagaccct
gtaaaagtctacgagcgtataaagggagaactcaaggacgttgttaagacccttcaagat
aaaggaatagaattgtggatcaggccagagctaacgggcaagccgacccaatttggcaac
ttaaaagagttaatcaagctcagccaagaggtggaaatggttcttcccgcaatagacttt
gcccatgctcacgcgaggaacaaaggggagtacaatacaataaaagagtggcgtgagatg
ctctctcttatggagcaggagcttgggagggaagcactggacaacatgcatattcacata
agcggaataaactacactgaaaagggtgaaaagaaccacctcaaccttcaggatagcgac
atgaactgggaagagcttttaaaggtgctcaaagagttcaaagttaaaggtgttgtgata
agcgaaagtccaaacattgaaggagacgcagttttaatgaagagaaagtacgaggagata
aaagtttag
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