Pimephales promelas (fathead minnow): 120459093
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Entry
120459093 CDS
T08155
Symbol
tjp1b
Name
(RefSeq) tight junction protein ZO-1 isoform X1
KO
K05701
tight junction protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04520
Adherens junction
pprm04530
Tight junction
pprm04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120459093 (tjp1b)
04530 Tight junction
120459093 (tjp1b)
04540 Gap junction
120459093 (tjp1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120459093 (tjp1b)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120459093 (tjp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
ZU5
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
120459093
NCBI-ProteinID:
XP_039502954
LinkDB
All DBs
Position
Unknown
AA seq
1886 aa
AA seq
DB search
MVNYQKYITVMQLALGVTAINRERSLPPRKHMWVFPKHDKDKYGPAVYYPKIHAFLPTPE
TVSLLDESEGSGHGKPSLRRIKGRIHRSKSLDSIDLLDSNSAAMEETVIWEQHTVTLHRA
PGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAEGLLQENDRVVMVNAVSMDNVDHA
YAVQQLRKSGKNAKITIRRKRKVQIPMGRTGERETMSEHDEDDDSYEEEIYEARSGRSAY
SGGGATGRRSGRGERLGGRRDRDRERSGSRERSLSPRSDRHSVSSNLPPRPAKVTLIKSR
KNEDSRPLLMEPAGSGCLALKDEKQTEYGLRLASHIFVKDISPESLAARDGNIQEGDVVL
KINGTVTENLSLIDAKKLIERSKGKLKMVVQRDERATLLNIPDMDDSIPSANASDRDDIS
DIHSVASDHSNRSHDRKRSSRSRSPDRRSEPSDHSRHSPPQISNGRAAGPTTQRTRPVHR
SRDEDRISKAGPLPLPAKMVEEMPKEQSAAREEKQLPPLPEPKPVYAQPGQPDVDLPVSP
ADAPVPSVTNDDSILRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEE
GDQILRVNNVDFANIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRT
HFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHQEVERGIIPNKNRAEQL
SSVQYTLPKTPGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAYERVVLREAGF
LRPVVIFGPIADVAREKLSREEADLFELAKSEPRDAGTDQRSSGIIRLHTIKQIIDRDKH
AVLDITPNAVDRLNYAQWYPIVVFLNPDSKQGVKNMRTRLCSESRKSARKLYERALKLRK
NNHHLFTTTINLNNMNDGWYGALKETIQQQQNQLVWVSEGKADGAPDDDLDIHDDRLSYL
SAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTDQELDETMNDEVGLPSEPAITRSSEPVRE
DPPVIQDAAGYPSYQHAVPQPEPVNRIDPAGFKMAAPQQQAEAQASPPPPSAVAAAPPAV
EPSTPLAGTNPEEPPGTPQADSLNSPVPVPDPQPEPELAQPPTHDPHQLLPPGPDPKMYK
KDLYSIDEPVRVNHGVKPPPPQQQPLGPPTSLSYSHQPVYQDQQPYRQYDHPPYGYDGGG
YAQPKPHNYDPHLHYDNRVPHYNEQWPPYDQQTSPQPPPAPCYPQGHQPPPAPLGYEPRS
PYEDGPTRDFSPPQSQYDGMPQMSYDNRPRHSKPAPVRYEEPPPPPASYEARSPFEPEPH
GFPGNAHRSPDPPKQYYGDSAMRPSYNPGLPNRAYKAPQHEPAMNSEPPAPPPKPEAVLS
PGEPPHPAASKALPPPPRDRDDDDDDPAMKPQSVLNRVKMFENKRSVSVDRAKETADVAG
IRPTDLPKPVSTPGPVLKANSLSNLEQEKPSYRAPEPQKPQTRVGNDVVRSSHYDPDEDE
EYYRKQLSYFDRRSFDNKPMSQPNTGVNRFHEPPKTPQPQIAYPFARAESVEKVSPVDKR
YEPVPPANPSPAPYSQPTPAAPPTALPKLSNIEVNSLPDPHSSPKAKPDLSALRAPARDD
PIQTNYLPPKSSINGTDAPPKTLGVPTSYNRYVPKPYTSTARPFERKFESPKFNHNLLPN
DTQSKPSVNNNLKPQISPQPQDTDSGVDTFTRTMDNRPKYQHNNINAIPKAIPVSPSALD
DDEEDEGHTVVATARGIFNCNGGVLSSIETGVSIIIPQGAIPDSVEQEIYFKVCRDNSIL
PPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKC
WQNKCLPGDPNYLVGANCVSVLIDHF
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattaccagaaatacattactgtaatgcagctggctctaggggtgactgccatc
aacagagagcgtagcctgcctcccagaaaacatatgtgggtcttccccaaacacgacaaa
gacaaatacgggcctgcagtttactatcccaagatccacgccttcctccccaccccagaa
accgtctctctgctggatgaatctgagggatcgggccacggcaaaccatccctgcgcaga
atcaagggccgaatccaccgcagcaagagcctggacagcatcgacctgctggactcaaac
agtgcagcaatggaggagactgtaatatgggaacagcacactgtaactctacacagggca
ccagggttcggcttcgggatcgccatctcaggcggaagggataaccctcactttcagagc
ggggagacgtccatcgtcatatctgatgtgctgaagggaggcccagccgagggcttgctg
caggagaatgacagggtggtgatggtcaacgccgtctccatggacaacgtggatcatgca
tatgcagtgcagcaacttcggaaaagtgggaagaatgcaaaaattaccatcaggagaaag
aggaaggtgcagatccctatggggcgcacgggtgagcgcgagaccatgtcggagcacgac
gaggacgatgacagttacgaagaggagatttatgaggcacgaagcggccggagcgcctac
agcgggggcggagccacaggccggaggagcggcaggggcgagcggctgggcgggaggagg
gaccgggacagagagcgcagcggctccagagagaggagtctgtccccacgctcggaccgc
cactctgtgtcctccaacctcccccctcgcccagccaaggtcaccctcatcaagtcccgc
aaaaatgaagattcccgcccactactgatggaaccagccggcagtggttgcctggcctta
aaggatgaaaaacaaacagaatacgggcttcgcctggccagccacatcttcgtaaaggac
atttcccccgagagcctggcagcccgagacggaaacatacaggagggagacgtggtgctc
aagattaatggcactgtgactgagaatctgtccctgatcgacgctaagaaactgatcgag
aggtcaaagggcaagctgaagatggtggtgcagagagacgagagggcgaccctgctcaat
atccccgacatggatgacagcataccttcagctaatgcctcggaccgagatgacatttca
gacatccactccgtggcctccgatcattccaaccgatcccacgatcggaagagaagcagc
cggtctcgatccccggatcgccgctcagagccctcggaccactccagacactctccaccg
cagatcagcaatggcagggccgcagggccgacgactcagagaacccgaccagttcacagg
agccgtgatgaagacaggatctccaaagctgggccgcttcctctacctgctaagatggtg
gaggagatgccgaaagagcagagcgcagccagagaagagaaacagctcccccctctgcca
gagcccaagcctgtgtacgctcaacccggccagcctgacgtggacctgcctgttagtccg
gcagacgcccccgtgcccagcgtcacaaatgatgacagcattttacggccgagcatgaag
ctggtgaagtttaagaagggcgagagtgttggattgagactcgctggtgggaatgatgtc
gggatatttgtggcgggagttctggaggacagtcctgctgctaaagagggcctggaggag
ggagatcagattctcagggtaaacaacgtggatttcgcaaacatcatccgtgaggaggca
gtgctgttcctactggacctgcccaaaggagaagaagtcaccatcttagcccagaaaaag
aaagatgtgtaccggcgcattgtagagtccgacgttggtgactcgttctacatcaggacc
cattttgagtatgagaaggagtcgccctacggcctgagcttcaacaagggtgaggtcttt
agagtggttgacaccctttacaatggcaaactgggctcctggcttgccatccgcatcggc
aagaaccaccaagaggtggagcggggcatcatccccaacaagaatagggctgagcagcta
tcgagtgtccagtacactctcccaaagactccaggaggggatcgggccgacttctggagg
ttcagaggcctccgtagctccaaacgaaacctgaggaagagcagagaggacctttccgct
cagcccgtccaaacaaagttccctgcttatgaaagagtggtgcttcgagaagctggtttc
ttgaggccagtggtcattttcgggcctattgcggatgtcgcaagagagaaactgtcgaga
gaggaggctgacctctttgaacttgcgaagagtgaacccagagacgcggggacagaccag
cgcagctctggaatcatccgtctccataccattaaacagatcattgaccgagacaagcat
gctgtgctggacatcacacctaacgcggtggatcgtctgaactacgctcagtggtacccc
atcgtggtgttcctgaatccagacagcaagcagggtgtcaagaacatgaggaccaggctc
tgttccgagtccaggaagagcgccaggaagctgtacgagcgcgctctcaaactgagaaag
aacaaccatcatctcttcaccaccaccatcaacttgaacaacatgaacgacgggtggtac
ggcgctttgaaagagaccatccagcagcaacagaaccagttggtttgggtctcagagggc
aaggcagatggtgctcctgacgatgaccttgatattcacgacgaccgcctctcctacctc
tcggcaccgggcagcgagtacagcatgtacagcactgacagccgccacacttccgactac
gaagacaccgatacggagggcggcgcctacaccgaccaggagctggatgagactatgaac
gatgaggtgggcctgcccagcgagccagccatcacacgctcatccgaacctgtccgagag
gacccgccggtcatccaggacgcagccgggtacccgagctaccagcatgctgtgccgcaa
ccagagccggtcaaccgcattgacccggctgggtttaaaatggcggcgcctcagcagcaa
gccgaggctcaggcctctccgccccctccctctgcagtggcagcagcgccccctgctgtc
gaaccctccacaccactagcgggtacgaacccagaggagccgcctggcacccctcaggcc
gactcccttaacagccccgtccccgttcccgacccccagcccgaacctgagctcgctcag
cccccaacacacgacccccaccagttgcttcctcctggcccagatccaaagatgtacaaa
aaggatctgtacagcatagatgagccggtgcgagtgaaccacggtgtgaagcctccccct
ccccagcagcagcctttaggcccccccacctcgctatcctacagccaccagcccgtctac
caggaccaacagccataccgccagtacgaccacccgccttatggctatgacggtggcggc
tacgcacaaccaaagcctcacaattacgacccgcacctgcactacgacaaccgcgtgcct
cactacaatgagcagtggcccccttacgaccagcagacttcaccccagccgccacctgcg
ccctgctaccctcagggccaccagccgccgcctgcacctctggggtacgaaccccgctct
ccgtacgaggacggccccacccgggatttcagcccccctcagtcccagtatgatggcatg
ccccaaatgagctacgataaccggccacggcactcgaaacctgcgccggtgcgctacgaa
gagcctccgccccctcccgcctcctacgaggcccgctcacctttcgagcccgagcctcat
ggtttccctggcaatgcgcaccgctcccctgatccaccgaaacagtattatggtgactct
gcaatgagaccctcgtacaaccctggccttccgaatcgagcgtataaagcgccccagcac
gagcctgcgatgaactcggaacctcccgctccgcctcccaaacccgaggccgtcttgtct
ccaggggaaccgcctcacccggcagcttccaaagcattgccgcctccacccagggacagg
gatgacgacgatgacgaccctgccatgaagccccagtctgtgctcaacagggtcaaaatg
ttcgagaacaagcgctccgtgtctgtagaccgagccaaggaaacggcggatgtagctgga
attcggcccacagatctcccaaaacctgtgagcacccctggtcctgtgctcaaagccaac
tctctcagcaacctagagcaggagaagccctcttacagagctccagagccccagaaaccc
cagacgcgtgtagggaacgacgtggtccgctccagccactatgacccagatgaagatgaa
gagtactataggaagcaactgtcgtactttgaccgccgcagctttgacaacaagcccatg
agtcagcccaacactggggtcaatcgcttccacgagccgcccaaaacacctcagcctcag
atagcatatcctttcgccagggcggagtctgtggagaaagtgagtcccgtggacaagagg
tacgagcccgtgccgcccgccaacccgtcgcctgctccctacagccagcccacacctgca
gctccgcccacagccctgcccaaactcagcaacatcgaggtgaactcgctgccagatcct
cacagctcccccaaagccaaaccggacctgtcggctctcagagctcccgcccgggacgat
cccatccagaccaactacctgccccccaagtcttccatcaacggcacggacgcccctccc
aagacgctaggcgtccccaccagctacaaccgctacgtccccaagccttacaccagcacg
gcccgacccttcgagcgcaagttcgagagccccaaattcaaccacaacctgcttcccaac
gacacgcagtccaagcctagcgtcaacaacaacctgaaacctcaaatctcaccccagccg
caggacaccgacagcggggtcgacacgttcacgcgcaccatggacaacaggcccaagtat
cagcacaacaacatcaacgccattcccaaggccatccccgtcagccctagcgcgctcgat
gacgacgaagaagatgaaggtcacaccgtggtggccacggcacggggcatctttaactgt
aacggcggggtgttgagctccatagagacaggagtcagcatcattatcccacaaggagcc
atcccagatagtgtggagcaggagatctacttcaaagtgtgcagggacaacagcattctg
ccccctctggacaaagagaaaggtgaaactctactcagtcccctggtgatgtgcggccct
cacggtctgaagttcctgaagcccgtggaactgcgtctaccacactgtgcgtctatgacc
cctgatggttggtcttttgctctaaaatcctccgactcctcgtcgggtgaccccaaatgc
tggcaaaacaagtgtttaccaggagaccccaattacctggtgggcgccaactgcgtgtcc
gtgctgatcgaccacttctga
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integrated database retrieval system
