Pungitius pungitius (ninespine stickleback): 119212739
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Entry
119212739 CDS
T07626
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119212739 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119212739 (raraa)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119212739 (raraa)
Nuclear receptors [BR:
ppug03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
119212739 (raraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119212739
NCBI-ProteinID:
XP_037319347
LinkDB
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Position
Unknown
AA seq
454 aa
AA seq
DB search
MYESVDVVGLNPSPNPFLLMDYYNQSRGCLIPEKGLVPGAPHPYSASMRNQHWNGSNHSI
ETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMV
YTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVLS
PETERMIDRVRKAHQETFPSLCQLGKYTTTNSSERRVSLDHDLWDKFSELSTKCIIKTVE
FAKQLPGFTTLTIADQITLLKSACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAG
FGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQAEKVDVLQEPLLEALKI
YVRRRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLE
SGAAGGRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagagcgtggacgtcgtgggactgaaccccagccccaacccctttttactgatg
gattactacaaccagagccggggatgcttgatcccggagaaaggactggtgcccggggcg
cctcatccctacagcgcgtccatgaggaaccagcactggaacggctccaatcactcgatc
gagacgcagagcaccagctcggaggagatcgtgccgagcccgccgtcgcctcccccgccg
ccccgcgtctacaagccctgcttcgtgtgccaggacaagtcctcggggtaccactacggc
gtcagcgcctgcgagggctgcaagggcttcttccggagaagcatccagaagaacatggtg
tacacctgccaccgggagaagaactgcatcatcaacaaagtcacccgcaaccgctgccag
tactgccggctgcagaagtgcctggaggtcgggatgtccaaggagtcagtaaggaacgac
cggaataagaagaaaaaggatgagaagaagcaggagtgcacggagagctacgtgctgagt
cccgagaccgagcggatgatcgacagggtgcgcaaggcccaccaggagacgttcccctcc
ctctgccagctgggcaaatacactacgactaacagctcagaacgacgcgtgtccttggac
cacgacctgtgggacaagttcagcgagctctccaccaagtgcatcatcaagacggtggag
tttgccaagcagctgccgggtttcaccacgctcaccatcgccgaccagatcacgctgctc
aagtcggcgtgcctggacatcctgatactccggatctgcacgcgctacacgccagagcag
gacaccatgaccttctcggacggactcacgctcaaccgaacccagatgcacaacgccggc
ttcggccccctcaccgacctggtgttcgccttcgccaaccagctcctccctctggagatg
gacgacgcggagacggggctgctcagcgccatctgtttgctgtgtggagatcgtcaggac
ttggagcaggcggagaaggtggacgtcctgcaggagcccctcctggaggcgttgaagatc
tacgtcaggaggaggaggccccacaaaccgcacatgttccccaagatgctgatgaagatc
acggatctgagaagcatcagcgctaaaggagctgagcgtgtcatcacgctgaagatggag
atccccggctccatgccccctctcatccaggagatgctggagaactctgagggtctggaa
agcggtgccgcaggcggccgtcccagcggcgcccccccaggcagctgcagccccagtctg
tcccccagctccgcccaaagcagtccagccacacaatcgccgtag
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