Poecilia reticulata (guppy): 103481985
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Entry
103481985 CDS
T05149
Symbol
rara
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103481985 (rara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pret03310
]
103481985 (rara)
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103481985 (rara)
Nuclear receptors [BR:
pret03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
103481985 (rara)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103481985
NCBI-ProteinID:
XP_008436077
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Position
LG19:complement(22975102..23144136)
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AA seq
455 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLITEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQDTFPSLCQLGKYTTTNSSERRVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDILQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGSRPSAAAPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgagagcgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattattacaaccagagcagaggatgcttgatcactgagaaggggctggtgcccggg
gcgccccatccttacagcacgtccatcaggaaccagcactggaacggctccaatcactca
atagagacccagagcaccagttcagaagagatagtgccaagcccgccctcgcctcccccg
ccgccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggattctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgggagaagaactgcatcatcaacaaagtcacccgcaatcgctgc
cagtactgtcggttacagaagtgcctggaagttgggatgtctaaggagtcggtgaggaac
gaccggaacaagaagaagaaggatgagaagaagcaggaatgcacggagagctacgtgttg
agtcccgacacggagcagatgatcgacagggttcgcaaggcgcaccaggatactttcccc
tctctctgccagctgggcaaatacactacgactaacagctcagaaaggcgcgtgtctttg
gacgtagacctgtgggacaagttcagcgaactgtccaccaagtgcatcataaagacggtg
gagttcgcgaagcagctgccgggcttcacgacgctcaccatcgccgaccagatcactctg
ctcaaagccgcctgtctggatattctgatactgcgcatctgtacacgttacacaccagag
caagacaccatgaccttctcagacggcctcacactaaaccgaacccagatgcacaacgcc
ggctttggtcccctcactgacctggtgtttgccttcgccaaccagctcctgcctctggag
atggacgacgcagaaacggggcttcttagcgccatctgcctgctgtgtggagatcggcaa
gatttagaagaagcagacaaagtggacatcctgcaggagcccctgctggaggccctgaag
atttatgtacggaagaggaggccccacaaacctcacatgttccccaagatgctgatgaag
attactgatctgaggagcatcagtgctaaaggagcggaacgcgtcatcacactgaagatg
gagatccctggatccatgccgcctctcatccaggagatgctggagaactctgagggcctg
gagagcggcgccgcaggcagcaggcccagcgccgccgccccaggcagctgcagccccagc
ctatcccccagctcggcccaaagcagtccagccacacagtcaccgtag
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