Piscirickettsia salmonis: PSLF89_1421
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Entry
PSLF89_1421 CDS
T03982
Name
(GenBank) ABC transporter
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
psal
Piscirickettsia salmonis
Pathway
psal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSLF89_1421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psal02000
]
PSLF89_1421
Transporters [BR:
psal02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PSLF89_1421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
FtsK_SpoIIIE
AAA_22
AAA_29
RsgA_GTPase
S_4TM
DUF87
AAA_16
AAA_13
AAA_23
AAA_28
MobB
Motif
Other DBs
NCBI-ProteinID:
ALT18230
LinkDB
All DBs
Position
898093..899871
Genome browser
AA seq
592 aa
AA seq
DB search
MSRQAIKPLKPSRWLMHYAKRSRLALLVMVGFALLGAFLLILQAYCIAHVIAGAFIYHLD
FSELLPYLWAVLALITSRAALLYGQRRASFMIGAKIRTVLRERLFQHVLDLGPRHGLPAG
ALSTALIEQIEALQDFYQDYLPQMYLAVLVPLMILIAIFPKSWLAGLIFLITAPLIPLFM
ALVGMGASSSHQKHLQTLARMSAQFLDIFQGLSTLKLFNQSKAQVEEVRAASEEYRSRTM
SVLKIAFMSSAVLELFASGAIALVAIYLGVSLLEYIGIPAHGMTLEIAVFILLLAPEFYA
PLRTLGTHYHARSKAIAAAEELMKVFALKPQALNVKAGQALDIQLSQGNKKFNIEFNNVS
FQYDGNSEETSLVLDAVSMQFAAYAHTAIVGASGAGKTTLLQLLLGFIQPTAGHILVNGQ
NLSSLNTQAWRKQLSWVGQNPRLFHGSVLDNIRLARPDATDQEVLAAAQSAFVDEFVHAL
PQGLHTRLGEFGMGLSGGQIQRIALARAYLKDSPILLLDEPMASLDSESEQRVLAALTDL
ARGRTVIHLTHRLAQVREVDAIYVLDQGQCLEHGSFAALMKRKSHFYRMATI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacaagcaatcaagccgttaaaaccctctcgttggctaatgcactatgccaag
cgatcgcgattggctttgttggtcatggttggttttgccttgctaggtgcttttttactg
atcttacaagcctattgtattgctcatgttattgctggcgcttttatatatcatttagat
tttagtgaattattaccctatctttgggccgttttggctttgattacctcacgcgcagca
ttgctttatggccagcgtcgcgccagttttatgataggagccaaaattagaaccgtctta
cgtgagcgactgtttcagcatgtgctagatttagggcctaggcatggcctgcctgccggt
gcattaagcaccgcgttgatagagcagattgaggcgctacaggatttctatcaagattat
ttgccacaaatgtatttggctgttcttgtacccttgatgatcttaatagccatctttccc
aagagttggttagccgggctgatttttttaattacagcgccactgattccgttatttatg
gctttggtgggtatgggagcgagcagtagtcatcagaagcatttgcagacattagcgcgc
atgagtgcacagtttcttgatatttttcagggtttaagcacattaaaattgtttaatcaa
agtaaagcgcaagtagaagaagtcagagccgcttccgaagaatatcgttcgcggactatg
agtgtattaaagattgcatttatgtcctcggctgtgcttgagctgtttgcctcaggtgcg
attgccctggttgctatttatctaggggtaagcttattggaatatattggcattcctgct
catggtatgacccttgaaattgctgtgtttattttattattagcaccagagttttatgcg
ccgctacgcactttaggtacgcattaccatgctcgcagcaaggcgattgctgctgctgaa
gaattaatgaaagtttttgccttaaagccacaagcgcttaatgttaaagctgggcaagca
ctggatattcagctaagtcagggcaataaaaaatttaatattgaatttaataatgtttct
tttcagtatgacggtaatagtgaagagacgtcactggttttagatgcggtgagtatgcag
tttgctgcatatgcacatacggcgattgttggtgcaagcggtgctggcaagacgacctta
ttgcagttattgcttggctttattcagccgacagcaggccatatattggtcaatggtcag
aacctatcatccttgaatacacaggcttggcgtaagcagttaagttgggttggacaaaac
ccgcgcttatttcatggcagtgttttggataatattcgcttagcacggccggatgcgacg
gaccaggaggttttagctgcggcacagtcagcatttgttgatgaatttgttcatgctttg
cctcagggtttgcatactcgactaggtgagtttggaatgggattatccggtggacagatt
cagcgtatagccttagcacgtgcttatttaaaagatagccctattttattattggatgag
ccgatggcaagtttggatagtgaaagtgagcaacgcgtacttgctgcactcactgacctt
gcaagggggcggacagtcattcacttaacacaccggctagctcaagtaagagaagtagat
gcgatttatgttttggatcaagggcagtgcttagagcatggcagttttgcagcattaatg
aagcgaaaatctcacttttatcgtatggcaacaatatga
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integrated database retrieval system
