T number | T03982 |
Org_code | psal |
Name | Piscirickettsia salmonis LF-89 |
Category | Type strain |
Annotation | yes |
Taxonomy | TAX: 1227812 |
Lineage | Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Piscirickettsia |
Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
Data source | GenBank (Assembly: GCA_000300295.4 Complete Genome) BioProject: 173790 |
Keywords | Fish pathogen |
Comment | Causative agent of Salmonid Rickettsial Septicaemia (SRS).
|
Chromosome | Circular |
Sequence | GB: CP011849 |
Length | 3184851 |
Plasmid | pPSLF89-1; Circular |
Sequence | GB: CP011850 |
Length | 180124 |
Plasmid | pPSLF89-2; Circular |
Sequence | GB: CP011851 |
Length | 33516 |
Plasmid | pPSLF89-3; Circular |
Sequence | GB: CP011852 |
Length | 51573 |
Statistics | Number of nucleotides: 3450064 Number of protein genes: 3155 Number of RNA genes: 75
|
Created | 2015 |
Reference | PMID: 26141111 |
Authors | Pulgar R, Hodar C, Travisany D, Zuniga A, Dominguez C, Maass A, Gonzalez M, Cambiazo V |
Title | Transcriptional response of Atlantic salmon families to Piscirickettsia salmonis infection highlights the relevance of the iron-deprivation defence system. |
Journal | BMC Genomics 16:495 (2015) DOI: 10.1186/s12864-015-1716-9 |