Phocoena sinus (vaquita): 116765124
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Entry
116765124 CDS
T07759
Symbol
DGCR8
Name
(RefSeq) microprocessor complex subunit DGCR8 isoform X1
KO
K18419
microprocessor complex subunit DGCR8
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116765124 (DGCR8)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
116765124 (DGCR8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
WW
PEGA
Motif
Other DBs
NCBI-GeneID:
116765124
NCBI-ProteinID:
XP_032510254
Ensembl:
ENSPSNG00000021917
LinkDB
All DBs
Position
14:complement(62424825..62446378)
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AA seq
837 aa
AA seq
DB search
METCESPSPLPREPAGGAVMENQACPLRALPRGQSPPPPLQTSSDAEVMDVGSGGDGQAE
PPAEDPLNFYGASLLSKGSFSKARLLVDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKI
SVSFTESCRSKDRKVLYTGAERDARAECGLALSPVSGDVHACPFGGSVGNGVGVGGESAD
KKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGLTAKAIVQRDRVDEEALKFSYE
DDFDNDVDALLEEGLCAPKKRRMEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPT
EPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKD
NEEREQNSELTPCGEVSPAKPLSRSAELELPLEEPDSLGADMGPPDEKDPLAAEAAPGAL
GQVKAKVEVCKDESVDLEEFRNYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESER
PILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSE
PFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNH
ISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKH
TVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQ
FARKNKPNLHILSKLQEEMRRLAEERVRPVRMPSGCGSAGELVALATCALMWGPCRACRG
SFKPLVAVTSLTLHSRARVLMPTEVPARGALRSRTFCSPATGLSPRLGCRFPYRLHP
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggagacatgtgagagcccctctcctctcccgcgtgagcccgcaggaggagcggtgatg
gagaaccaagcttgccccctccgagcgctgccccgtggacagtctccaccacctcccctg
caaacgtccagtgatgcagaggtaatggacgttggctctggtggtgatggacaggccgaa
ccccctgctgaggacccactcaacttctacggagcttctcttctctccaaaggatccttc
tctaaggcccgcctcctcgtagacccgaactgtagtggccacagcccgcgcaccgcccgg
cacgcacctgcggtccggaagttctcccctgaccttaagttgcttaaggatgtaaagatt
agcgtgagctttaccgagagctgcaggagtaaggacaggaaggtgctgtacacgggagcg
gagcgcgacgcgcgggcagagtgcggtctggcccttagccctgtcagtggagacgtgcat
gcttgtccctttggcgggagtgttggtaacggggtaggcgtagggggtgagagtgcggat
aagaaggatgaggagaatgagctggatcaggaaaagagagtggagtacgcagtgctggat
gagttagaagattttactgacaatttggagctagatgaagaaggagcaggcgggctcacg
gctaaagcgatcgtgcagagagacagagtggacgaagaggccttgaagttctcctacgag
gatgattttgacaacgatgttgatgctctgctggaagagggcctctgtgctcccaaaaag
aggcggatggaggagaagtatggaggagacagcgaccacccatcagacggagagacaagt
gtgcagccaatgatgaccaagattaaaacagtgctcaaaagtcgtggccgtccacctaca
gaaccactgccggacgggtggatcatgacgttccataactctggagtccccgtgtacctg
caccgagagtctcgggtggtcacctggtccaggccatacttcttgggaacgggaagcata
cggaaacatgaccctcctctgagtagcatcccctgtctgcattacaagaaaatgaaagac
aatgaggaaagggagcaaaacagcgagctcaccccctgtggggaggtgtctcccgccaag
cccctgagccgatctgcagagctggagctccccctggaagagcccgactccttgggggct
gacatggggcccccagatgagaaggatccactggcggccgaggccgcccccggggccctg
gggcaagtgaaagccaaggtggaagtgtgcaaagatgaatcagttgacctcgaggagttt
cggaactacctggagaagcgctttgacttcgagcaagttaccgtgaagaagttcaggaca
tgggctgagcgtcggcagttcaaccgagaaatgaagcgaaaacaggctgagtcagagagg
cccatcctgccggccaatcagaagctcatcactctgtctgtgcaggatgcgcccacgaag
aaagagtttgtcatcaaccccaatgggaagtcggaggtctgcatcctgcacgagtacatg
cagcgtgtcctcaaggtccgccctgtgtacaacttctttgaatgtgagaacccaagtgag
ccttttggtgcctcggtgaccatcgatggtgtgacctatggatctggaacggcaagcagc
aaaaaactcgcgaagaataaagctgcccgggccacgctggaaatcctcatcccagacttt
gttaaacagacctctgaggagaagcccaaagacagcgaggagctggagtattttaaccac
atcagtatcgaggactcgcgagtctacgagctgaccagcaaggctggactgctatctccc
taccagatcctccatgagtgccttaaaagaaaccatgggatgggggacacctccatcaag
tttgaagtggttcctggtaaaaaccagaagagtgaatatgtcatggcatgtggcaagcac
acagtgcgcggctggtgcaagaataagcgagttgggaaacagttagcttctcagaagatc
cttcagctgctgcacccacacgtcaagaactgggggtccttgctgcgcatgtatggccgt
gaaagcagcaagatggtcaaacaggagacgtcggacaagagtgtgatcgagctgcagcag
tttgcccggaagaacaagcccaacctgcacatcctgagcaaactgcaggaggagatgcgg
aggctggcggaggagagggtgaggcctgtccgcatgccctcaggctgtggcagtgctggg
gagctggtggccctggccacctgtgcactgatgtggggtccctgtagggcttgtcggggc
agcttcaaacccctggtggctgtgacctccttgaccctccactcccgggcacgcgtcttg
atgcccacagaagtgccagcacgtggtgccttgcgatcgcgcacattctgcagccccgcc
accggcctttcaccgaggttgggctgcaggttcccatatcgcctacatccttga
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