Polyodon spathula (Mississippi paddlefish): 121301899
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Entry
121301899 CDS
T07273
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121301899
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121301899
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121301899
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
121301899
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Paralog
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121301899
NCBI-ProteinID:
XP_041087541
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Position
28:complement(885169..991222)
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AA seq
456 aa
AA seq
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MASNSSSCPTAQGGTHLNSYPVPHYPFFFPHVIRGLSPPGLNALQHQLPVSGYSTPSPAT
IETQSTSSEEIVPSPPSPPPPPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
LYTCHREKTCIINKVTRNRCQYCRLQRCLEVGMSKESVRNDRNKKKKEEKKQECTESYTL
SPETELMIEKVRKAHQETFPSLSNLGKYTTNNSSDERVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQSDKVDILQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGV
DPLGNPQTRGKGAPSGSCSPSLSPSSAQSSPSTHSP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaacagcagttcttgccccaccgcacaagggggcactcacctcaacagctat
cccgtgccgcactaccccttcttcttcccgcatgtaatcaggggtctctccccacccggc
ctcaacgcactccaacaccagctaccagtcagcggctacagcactccatctcccgcaacg
atcgagacgcagagcaccagctcggaggagattgtgccaagccccccctccccgcccccg
cccccccggatctacaagccgtgcttcgtgtgtcaggacaagtcctcaggataccactac
ggggtcagcgcctgcgagggctgcaaggggtttttccggaggagcattcagaagaacatg
ttgtacacctgccatcgagagaagacctgcatcatcaacaaggtgacgcgaaaccgctgc
cagtactgccggctgcagaggtgcctggaagtcgggatgtctaaagagtcggtgaggaac
gaccgcaacaagaagaagaaggaggagaagaagcaggagtgcacagagagctacacgctg
agccccgagaccgagctcatgatcgagaaggtccgcaaggcccaccaagaaaccttccca
tccctctccaacctgggcaaatacactacaaataacagctcagacgagcgcgtgtccctc
gatgttgacctgtgggataagttcagtgagctttccaccaaatgcatcatcaaaaccgtc
gaattcgccaaacaactgccaggcttcaccacgctaaccatcgccgaccaaatcaccctt
ctcaaagcagcctgcctcgacatcctgatcttgcggatctgcacacgctacacccccgat
caggacaccatgacgttctcggacgggctgactctgaaccgcacacagatgcacaatgcc
ggctttggcccgctcaccgacctcgtcttcgccttcgccaaccagctgctgccgctcgag
atggacgacgcagagacagggctgctcagcgccatctgcctgctgtgtggagaccggcag
gacctggagcagtctgacaaggtggatatcctgcaagagccattgctggaggcactgaag
atctacgtgaggaagaggcggccgcacaagccacacatgtttcccaagatgctgatgaag
atcacagacctgcgcagcatcagcgccaagggtgcagagcgtgtgatcactctgaagatg
gagatcccgggttcgatgccccctcttattcaggagatgctggagaattcggagggcgtc
gacccactggggaacccccagaccagaggaaagggggccccgtcaggcagctgcagcccc
agcctgtcccccagctcagcccaaagcagcccctccacacactccccctag
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