Robiginitalea biformata: RB2501_09620
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Entry
RB2501_09620 CDS
T00992
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00300
Lysine biosynthesis
rbi00550
Peptidoglycan biosynthesis
rbi01100
Metabolic pathways
rbi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RB2501_09620
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RB2501_09620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RB2501_09620
Enzymes [BR:
rbi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RB2501_09620
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
EAR17152
UniProt:
A4CJP4
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Position
complement(1412676..1413953)
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AA seq
425 aa
AA seq
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MDTKSLYEFFLKHPKVSTDSRTIPENGIFFALKGPNFNGNEFAIEALSRGAALAVVDEGD
FPDEPRCIRVPDALAALQQLAMHHRLQCKARIIGLTGSNGKTTTKELIAAVLSKKYRTLA
TRGNLNNHIGVPLTLLRIAPETELAIVEMGANHQGEIRLLSEMAQPDFGYITNFGKAHLE
GFGGVEGVIRGKSELYENLMERGATIFMNADDPVQFEKLAGYANCVGFSTRNPAYMQIKN
LTDGPAVRLQVDDVVVQTQLTGRYNFSNCAVSACIGKHFGVPAEAIAEALESYIPANNRS
QLIERGNLRILLDAYNANPTSMAAALENLAEMDSPRKIAILGDMFELGAEAAAEHEAVGR
FALSKNPEKLYLVGQHFYDTALPAARFPDFAALSRELKANPLTGPATVLIKGSRGMALER
VLEFL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaaaagcctgtacgagttcttcctgaaacacccgaaggtcagtacggatagc
cgaaccatcccggaaaacggcattttttttgcgctgaaaggacccaatttcaacgggaat
gaatttgcgatagaagccctgtcccggggagcggccctcgcagtggtagacgaaggggac
tttcccgacgagccccgctgcatccgggtgccggatgcactcgccgccctccaacaactg
gccatgcaccatcgccttcaatgcaaggcccggatcatcgggcttaccgggagtaatgga
aagaccacgaccaaggagttgatagccgccgtcctgagcaagaaatatcggacactcgct
acccggggaaacctcaacaaccacatcggcgtccccctcaccctgctccggatcgcgccg
gagacagaattggccatcgttgaaatgggggcaaaccaccagggggaaatccgcctgctc
agtgaaatggcacaacccgatttcggatatatcacgaatttcggaaaagcccacctggag
ggattcgggggggtggaaggcgtcatccggggaaaaagcgagctctatgaaaacctgatg
gaacggggcgccaccatttttatgaacgccgacgacccggtgcagttcgaaaaactggca
gggtatgcaaattgcgtgggttttagcacccgaaaccccgcctatatgcagatcaaaaac
ctgaccgacgggccggctgtccgattgcaggtagatgacgtggtggtgcagacccaatta
acggggagatataacttttcgaattgcgcagtttctgcctgtatcggtaaacactttggg
gtacctgctgaagcgattgccgaagccctggaatcatacatcccggcaaacaaccggtcg
caattgatcgaacgcggcaacctgcgcattctcctggacgcctacaacgcaaatcccacg
agcatggcggcagcactcgaaaacctcgccgaaatggatagcccccggaaaattgccatc
ctgggggacatgtttgaactgggtgcggaggcggctgcggaacacgaagccgtcgggagg
ttcgcactgtccaaaaacccggagaaactctatctggtgggacagcacttttacgatact
gcgctgccggccgcacggtttccggattttgcagccctttcccgggaattaaaggccaac
ccgttaaccgggccggccaccgtcctgatcaaaggctcccggggcatggccctggaacgc
gttctggagttcctctga
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