Salmo salar (Atlantic salmon): 106561009
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Entry
106561009 CDS
T04363
Symbol
cacna2d4
Name
(RefSeq) calcium voltage-gated channel auxiliary subunit alpha2delta 4
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04260
Cardiac muscle contraction
sasa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106561009 (cacna2d4)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
106561009 (cacna2d4)
04261 Adrenergic signaling in cardiomyocytes
106561009 (cacna2d4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106561009 (cacna2d4)
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106561009 (cacna2d4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
dCache_1
VWA
VWA_2
CobT_C
VWA_CoxE
zinc_ribbon_5
dCache_2
Motif
Other DBs
NCBI-GeneID:
106561009
NCBI-ProteinID:
XP_013980021
UniProt:
A0A1S3KMS0
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Position
ssa10:71272160..71344764
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AA seq
1173 aa
AA seq
DB search
MSSSGDTVGPGRMGLLPRADTVDPGRIELGPRADTVDPGRMKLGPRADTVDPYRMGLGPR
AESGGVTSRLGPRGTPAGLRLGLWILCFSWFCFTAHAQMKIPPETVQVWANVLSVQLREA
TTRYSGANILQKKFRDVESIIKIVDIDGRAQVKNFSEDIERMLGSKMKSVKRLAESAEDA
DLYHEFNKTLQFDYYNSMLVNTMDDDGNFIELGGEFPLEENEHFNNIPVNTMQSDVQVPT
NVYNKDPYILNGIYMSEALNDVFINNFKKDPTLTWQYFGSSSGFFRIYPGIKWTPDSNGV
AAFDCRNRNWYIQAATSPKDIIIVVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIA
YTDYVRYVEPCFQGTLVQADLDNREHFKVLVDELHVKGEGKVAKAMKESFKILNEAATKG
QGSLCNQAIMLITDGAMEDFKDVFEEFNWPDRRVRLFTYLIGREMTFADNTKWIACNNKG
YYTHISTLADVQENVMEYLHVLSRPMVINHNHDIIWTEAYMDAVLFATKAQSLLLMTSVA
MPVFSKKKETLSHGILLGVVGSDIPLLEVMKLAPRYRLGPHGYAFLITNNGYILAHPDLR
PLYKDGKKLKPKPNYNSVDLAEVEWEDIDETLRTAMVKGETGTLSLNVRASVDKAKRPMF
LTNDYFYTTINDTPFSFGMVLTRGHGQLMFMGTVSVEEGLHDLTSPDLSIAAEWTYCETD
IDPHHRKYSQLQAVIRYLQGKEPDLECDEVLLQQTLFDAVVTAPLEAYWQAIMLNASGME
AGVETAFLGTRSGIIRLTRYTGMETRVAKKFLTPADKDNLFTMDHFPLWYRLAMENPPGR
FLYYMPVEDNDNKDKTGASKYVIAVTAVTVSSGGKTAMAGAIGVQMSLELLEKRLWAITF
QPNDTDCNEVEGVCPLTCQSIDVNCFLVDSNGFIIVSKERSEVGRFFGEVDGSVMTALIK
SGMFKQVSLYDYQGMCRSGHSHSSSARPLLSPFYGLAAVIKWFFSHMLMFLLEFNLCGLW
HSDYIVDAKAGYHTSHKAKKVDALQPCDTEYPGFVYDSSIKETNSLIKCGLCQKMFVVQA
VPESNLVLMVVQADCDCSRQYSSITLEPKEVKYNASVKCNRMKSQKVRRRPNSCHAYHPK
ENAKDCGGASEISLSVAVFLTSLATSLALCRWT
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcaggcgacacagtgggcccaggcaggatgggactactacccagggccgac
acagtggacccaggcaggatagaactaggacccagggctgacacagtggacccaggcagg
atgaaactaggacccagggctgacacagtggacccttacaggatgggactaggacccagg
gccgagtcaggtggagtaacgagcaggctgggacccagagggactccagcggggctgagg
ctgggcctgtggatcctgtgtttcagctggttctgcttcactgctcacgctcagatgaag
ataccacctgagacggtccaagtttgggcaaatgtcctttcagtgcaactacgcgaggct
accacaagatactcgggagctaacattctgcaaaagaaattcagagatgtagagtccatt
atcaagatagtggacatcgatgggagagcccaagtgaagaacttttcagaggacatagag
agaatgctggggtccaagatgaagtccgttaagcggttggctgagtctgcggaggatgcc
gatttgtaccacgagttcaacaaaactctacagtttgactattataactccatgctggtg
aacacaatggacgacgatggtaacttcatagagctgggtggggagtttcctctggaggag
aatgagcatttcaacaacatcccagtcaacacaatgcagagtgacgtacaggtccccacc
aatgtctacaacaaagatccctacatcctcaatggaatctacatgtcggaggctctgaat
gacgtgttcatcaataacttcaagaaagaccccactctcacctggcagtactttggcagc
tcctcaggtttcttcagaatctaccctggtatcaaatggactccagattcaaatggtgtt
gctgcttttgactgcaggaaccgtaactggtatattcaggctgccacctcaccaaaggac
attatcattgtggtggacatcagtggcagtatgaaaggcttgaagatgaccattgccaaa
cacaccatcaacaccatcctggacacactgggggagaacgactttgtcaacgtcattgct
tacactgactacgtgcgctacgtagagccctgcttccaaggcactctggtgcaggctgat
ttggacaaccgtgagcattttaaggtgctggtggatgagctgcatgtgaagggagagggc
aaagttgcaaaggccatgaaggaatcgttcaaaatcctgaacgaggcagcgaccaagggc
caaggcagtctgtgcaaccaggcaatcatgctgatcacagatggagccatggaggacttc
aaggacgtgtttgaagagttcaactggcctgatcgcagggtgcggctcttcacttacctt
ataggcagagagatgacctttgcagacaacaccaagtggatagcctgcaacaacaagggt
tactacacacacatctccactctggctgacgtacaggagaatgtcatggagtaccttcat
gtcttgagtcgaccaatggtcatcaatcacaatcatgacatcatctggacggaggcctac
atggacgctgtgctctttgccacaaaggctcaaagtttacttctcatgacctccgtggca
atgcctgtcttcagcaagaagaaagagacgctgtcccatgggattctgctgggtgtggtg
ggttctgacatccccctgctggaggtcatgaagctggctccgagatataggctgggtcca
catggttacgccttcctcatcaccaacaacggttacatcctggcacaccctgacctacga
cctctttataaagatggtaagaagctgaaacccaagcccaactacaacagtgtggacctg
gctgaggtggagtgggaggacatagatgagacactaaggacagccatggtgaaaggggag
acgggcactctgtccttaaacgtgagagcatcagtggacaaagcgaaaaggcctatgttc
ttaacaaatgactatttctacacaaccatcaacgacaccccattcagttttggtatggtg
ctgaccaggggtcacggacagctgatgttcatggggacggtctctgtggaagagggcctg
catgacctgacgtcccctgatctatccatagccgctgagtggacatactgtgagacagac
attgaccctcaccaccgcaaatactctcagctccaggctgtcattcgctacctgcagggg
aaggagcctgacctggagtgtgacgaggtgctgctgcagcagaccctgtttgatgctgtg
gtgacagcccccttagaagcctactggcaggcaataatgctcaatgcatctgggatggag
gcgggtgtggagacagccttcctgggaactcgctctggcatcatccggctgaccagatat
accggcatggagaccagggtcgccaagaagttcctgactccagcggataaggacaacctg
ttcaccatggaccacttccccctgtggtaccgtctggccatggagaaccctcccggaaga
ttcctctactacatgccggtggaggacaacgacaacaaagacaagacaggggcgtcgaag
tatgtcatagctgtcacagctgtgactgtgtcatcgggaggcaagacggccatggctgga
gccatcggggtgcagatgtccttggaactgctggagaagaggctatgggccattaccttt
cagcccaatgacacagactgtaatgaagtggaaggtgtctgccctctcacctgtcaaagc
attgatgtcaactgtttccttgtggacagcaacggtttcatcatagtctcgaaagagagg
tcagaggtcggacgtttctttggggaagtggacggatctgtgatgacagcgttgatcaag
tcaggcatgttcaagcaggtgtcgctgtatgactaccagggcatgtgtagatcaggacac
agtcattccagtagtgctcggcctctgctcagtcctttctatggccttgcagcagtgatc
aaatggttcttttctcacatgttgatgttcttactggagttcaacctctgtgggttgtgg
cactcggactacattgtagacgccaaggctggctaccatacatcccataaagccaagaag
gttgacgcgctgcagccgtgtgacacagagtatcctggcttcgtgtacgattcctccatc
aaagagaccaacagcctcatcaaatgtggcctttgtcagaagatgtttgtggtgcaggcg
gttcctgaaagtaacctggtgttgatggtggtccaggcggactgtgactgctcccgccag
tactcctccatcacactggagcccaaggaggtcaaatacaatgcatcagtcaagtgtaac
aggatgaaatctcagaaagtccgccggcgcccaaactcctgtcacgcctatcatcctaag
gaaaatgccaaggactgtggaggagcttcagagatcagcctatcggtggccgtcttcttg
acttctctggccacttcattggccctctgcagatggacataa
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