Syngnathoides biaculeatus (alligator pipefish): 133495178
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Entry
133495178 CDS
T09681
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133495178
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sbia03310
]
133495178
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133495178
Nuclear receptors [BR:
sbia03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
133495178
BRITE hierarchy
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133495178
NCBI-ProteinID:
XP_061665488
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All DBs
Position
22:complement(12024143..12260419)
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AA seq
455 aa
AA seq
DB search
MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLLPEKGLVPGGPHPYSSSVRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHKETFPSLCQLGKYTTNNSSERRVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLIPLEMDDAETGLLSAICLLCGDRQDLEQAEKVDILQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGASGGRPCATPPGSYSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgaaagtgtggacgtagtgggactgaaccccagcccgaacccctttttgatg
atggattactacaaccagagcagagggtgtctgctcccggagaaaggtctggtgcccggg
ggccctcacccgtacagctcgtccgtcaggaaccagcactggaacggctccaatcactcg
atagagacgcagagtaccagctcggaggagatagtgccaagcccgccctcgcctcccccg
ccgccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgcgaaggctgcaagggcttcttccggagaagcatccagaagaacatg
gtgtacacctgtcaccgggagaagaactgcatcatcaacaaagtcacccgaaatcgctgc
cagtactgtcggcttcagaagtgcctggaagtcggaatgtccaaggaatctgtgagaaac
gaccggaacaagaagaagaaggacgaaaagaagcaggagtgcacagagagctacgtgctg
agtcccgacaccgagcaaatgattgacagagtccgcaaggcccacaaggaaacgttcccc
tccctctgccagctcggcaaatacactacgaacaacagctcggaacgacgcgtgtccttg
gacgtggacctctgggacaagttcagcgagctgtccaccaaatgcatcatcaaaacggtg
gaattcgccaagcagctccccggcttcacgacgctcaccatcgccgaccagatcaccttg
ctcaaagccgcctgtctggacatcctgatactgcggatctgtacacgctacaccccagag
caagacaccatgacattctcggacggactcacgctaaaccggacccagatgcacaacgcc
ggcttcgggccgctcaccgacctggtcttcgccttcgccaaccagctgatcccgctggag
atggacgacgcggagacagggctgctcagcgccatctgtctgctgtgtggagatcgtcag
gatctggagcaagcggagaaggtggacatcctgcaggagccgcttctggaggcactgaag
atctacgtgaggaagaggaggccccacaaaccccacatgttccccaagatgctgatgaag
atcaccgatttgaggagcatcagcgctaagggggcggaacgcgtcatcacgctgaaaatg
gagatcccgggctccatgccccccctcatccaggagatgctggagaactccgagggcctc
gaaagcggcgcctcggggggccgcccctgcgccacgccgccgggcagctacagccccagc
ttgtccccgagctccgcccaaagcagcccggccacgcaatcgccgtag
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