Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_07400
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Entry
STU288_07400 CDS
T02639
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STU288_07400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
setu03400
]
STU288_07400
Enzymes [BR:
setu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
STU288_07400
DNA repair and recombination proteins [BR:
setu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
STU288_07400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Flagellin_IN
Motif
Other DBs
NCBI-ProteinID:
AGK09088
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All DBs
Position
1516101..1516958
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AA seq
285 aa
AA seq
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MKYIGAHVSAAGGLANAPARAAEIGATAFALFTKNQRQWRAAPLTPQVIDDFKIACEKYH
FSAAQILPHDSYLINLGHPVSEALEKSRDAFLDEMQRCEQLGLTLLNFHPGSHLMQIAQE
DCLARIAESINIALAQTEGVTAVIENTAGQGSNLGFEFEQLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTPEACEKTFAEFGKIVGFQYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG
HDAFRWIMQDGRFDGIPLILETINPDIWAEEIAWLKAQQIAEAMA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatcggagcgcacgtcagcgctgctggcggtctggctaacgcccctgcccgc
gcggctgaaattggcgcaacggcctttgcgcttttcacaaaaaaccagcgtcagtggcgt
gccgccccccttactccccaggtcattgatgactttaaaatcgcctgtgaaaagtatcat
ttctcggcggcgcaaatccttccccacgatagttacctgattaatctgggccatccggtc
agtgaagcgctggaaaaatcacgcgatgcctttctcgatgaaatgcagcgctgtgaacaa
ctcggcttaaccttgcttaattttcatcccggtagccatctgatgcagattgcacaggag
gattgcctggcgcggatcgcggaatccatcaatattgccctcgcgcagaccgagggcgtt
acggcggttatcgaaaatacagccggtcagggcagtaatctggggtttgagtttgaacag
ttagccgccatcatcgacggcgtggaagataagtcgcgcgttggcgtctgtatcgatacc
tgccatgcctttgccgccggatacgatctgcgtacgccagaggcgtgcgaaaaaacattc
gccgaattcgggaaaattgtcggatttcagtatttgcgcggaatgcacctgaacgacgcc
aaaagcgccttcggtagccgcgttgaccgccatcacagtctgggtgaaggcaatatcggc
cacgatgcgtttcgttggattatgcaggatgggcgttttgacggtattccgctgatactg
gagaccatcaatcctgatatctgggcggaagagattgcgtggttaaaagcccagcaaatt
gccgaagcgatggcctga
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