Sinocyclocheilus grahami (golden-line barbel): 107574449
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Entry
107574449 CDS
T04918
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sgh00535
]
107574449
00536 Glycosaminoglycan binding proteins [BR:
sgh00536
]
107574449
04091 Lectins [BR:
sgh04091
]
107574449
Proteoglycans [BR:
sgh00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
107574449
Glycosaminoglycan binding proteins [BR:
sgh00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
107574449
Lectins [BR:
sgh04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
107574449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
I-set
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
107574449
NCBI-ProteinID:
XP_016116375
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MSLIWLLLYTCIHDISGMIIFGDMADQDSTLSVSIPVEQPLHPILGGSMVIPCYFQDNTV
QDPGAPTPAPLSHRIKWSYIYKGSISLILVASGGMVQVETDYMDRVHMVNYPMVPTDGTI
EISELHSSDSGTYRCEVMQGIEDNYDSVEMQVQGIVFHYRAISTRYTLTFEMAKAACIQN
SAVIATPAQLQAAFDDGYHQCDAGWLSDQTVRYPIHEPREPCYGDKENFPGVRTYGVRDI
NETYDVYCFAEKMSGSVFYSMSVEKFTFAEAEDQCAKLGAQLATTGQLYLAWKAGMDVCN
AGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSHYDAICYVEKEDKVST
KTSPFPELDTTTDSMFSVATVTSSPSDYTEEMTTEGEVRGQLVTDEPLNTTIKESPLPLP
PNITEVEEDIINVATALPYLGYEIPMDNVTAEMKGVVFHYRTNSRRYAYTFEEAQVACQK
LGAIIATPELLQAAYEAGLHQCSAGWLHDQTVRYPVVHPQKNCSGDQEDLPGIRSYNVRP
AHERYDVYCYMDQIKGEIFHVSSLAGFTYYEAVDHCRKLGSTLASTGELYAAWNQGFHKC
SPGWLSDRSVRYPVRNPGFGCGGNKTGVHTVYAQPNQTGFPNPYSRYGAYCIKANLSMLL
DEDMLNASRMGMDLNMTDITELLRPVHPIVPPLFVDLSGSGSGSGSISGDPDSSSGYMSG
SGIPSGSISGSGQSGYGSGHLVRYQEGADTIMWQTSASGSALEVREGSGSGVIITSGIES
GDQESGEESGLFHEQSGASGLPLGLGSGISGSGTSGFFSGVESSGSGFFGVSFINTEIID
LTARPSGEQELSDVSPFDLTDVSGFSSAPGSGSASGFGSGTIIDFGSGSAIGFGSGSASG
ASVYPSHPSGEVSGHIQSQDVKIIILTDDEVELTFRPTIGTEQGRGSVEISGEGSSQEHY
AEDLSISLSNSTLYKDYWSANETVDLIPERYEQLNAITEAFDVTDQSPLNTTPPTPSILT
TSSASLQTPKAMEEPSVTDASANPCDPNPCGQGLCSLQDGITVCQCHSGFSGGNCSTLVQ
GCAEGWMEFMGSCYIHFDERETWTSAEQHCQELNSHLVSISSQEEQEFVKTQVHDYQWIG
LNDKDVQNQFRWTDGSPLEYENWRPNQPDNYFSTGEDCVVMIWHEDGKWNDVPCNYHLPF
TCKSGPVTCSSPPEVKNARMLGNSKDRYPVNSIIRYQCDSGFTQRHLSVVHCLPDGQWQE
PKVECIGGKIIDKLQKRSLKTHPKAVYSRTWTKVL
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgatttggctcctgctgtatacatgcatccatgacatttctggtatgatcatt
tttggagacatggctgatcaggacagcaccttgagtgtaagcatccctgtggaacagcca
ctgcatcccatattggggggaagcatggtcataccttgctactttcaggacaacactgtc
caggacccaggtgccccaacccctgccccactgtcccaccgtattaaatggagctacatc
tacaagggcagtatatctcttattctcgttgccagtgggggcatggtgcaggttgagacc
gactacatggaccgggttcatatggtaaactatcccatggtgccaacagacggtaccatt
gagatctcagaactccactccagtgactctggcacctaccgctgtgaggtcatgcagggg
attgaagataactatgattctgtagaaatgcaagttcaaggcattgtttttcactaccga
gcaatatctacccgatataccttgacatttgagatggcaaaggcagcctgcatccagaac
agtgctgttattgcaactcccgcacagttgcaagctgcctttgatgatggataccatcaa
tgtgatgctggttggctttcagaccaaactgtgaggtatcccattcatgagccaagggag
ccctgctatggagacaaagaaaatttcccaggggtacgaacatatggagtcagagacatc
aatgagacctatgatgtgtactgttttgcagagaaaatgtcaggcagtgtgttctactct
atgtctgtggagaagttcacctttgcagaggctgaagaccagtgtgcaaagttgggagcc
caattggccaccacagggcaactctacctagcatggaaggctggcatggatgtgtgcaat
gctggctggctagcagacaggagtgtgcggtaccccattaacatagctcgaccccagtgt
ggtggggggcttttgggagtgcgaacagtttacctttttcctaatcagactggctatcca
tacccagactcccactatgatgcgatctgttatgtagaaaaagaagataaggtttcaaca
aagacctcaccatttcctgaattagacactacaacggattccatgttcagtgtggctaca
gtcacctcaagcccttcggactatactgaagagatgaccacagaaggggaggtccgtggc
cagctagtgacagatgagcctcttaacaccacaatcaaagaaagtcctctacctctacct
cccaacataactgaggttgaggaggacatcatcaatgtggccacagctctgccttacctg
ggatatgagattcccatggacaatgtcactgctgaaatgaagggagtagtattccactat
cgcactaactccagacgctatgcttacacctttgaggaagcacaagtggcatgtcagaag
ctgggagcaatcatagccacccctgagcttcttcaggctgcttatgaagctggccttcat
caatgcagtgcaggttggctacatgaccagactgtcaggtatccagttgtgcatccacaa
aagaactgctctggagaccaggaggatcttcctggcattcgctcttacaatgttaggcct
gcacatgagcggtacgatgtgtactgctacatggaccagataaagggggagatcttccat
gtgagttctttagcaggcttcacctattatgaagctgttgaccattgcagaaaactgggt
tctacacttgcctcaactggagaactctacgctgcatggaatcagggtttccacaagtgc
agtcctggctggctctctgatcgcagtgtccgctatcctgtccgcaacccaggctttggt
tgtggtggaaacaagacaggagtgcacactgtttatgcacaaccaaatcaaacaggcttc
ccaaacccatactccagatacggtgcatattgcatcaaagcaaatctgtctatgctgctt
gacgaagatatgttgaatgcttcaaggatggggatggatcttaacatgacggacataaca
gagctgcttagacctgttcatccaattgtccctcccttgtttgtggacctgtctggatct
ggatcaggctcaggctcaatatcaggtgatcctgattccagttccgggtacatgtcaggg
agtggcatacccagtgggagcatatccggttctggccaaagtggttatggatcaggtcac
cttgtgaggtaccaagaaggtgcagatacaatcatgtggcagacttctgcctcaggcagt
gctttggaggtaagagaaggtagtggcagtggtgttatcattacttcaggaatagaatca
ggggaccaagaatctggagaggagtctggactctttcatgaacaaagtggagctagtggc
cttccattgggacttggcagtggaattagtggttcaggaacaagtggattcttcagtggt
gtggaatcgagcggatcaggcttctttggtgtgtcatttataaacacagaaattattgat
ctgactgcaagaccttctggagaacaggaattgtctgacgtttctccttttgacttgact
gatgttagtggtttcagctctgctcctggatctggctctgcctctggatttggatctggc
accatcattgactttggatctggctctgccattggctttggatctggctctgcttctgga
gcttcagtttatcccagtcatccctcaggtgaggtatctggccacattcagagtcaagat
gtaaagattatcattctaacggacgatgaggttgagttgacatttaggcctacaatcgga
acagaacagggtcgtggatcagtggagatcagtggagagggcagtagtcaagaacattat
gctgaggacctctccatatctctttctaatagtactttatataaagattattggagtgcc
aatgaaaccgttgatctcataccagaaagatatgagcaacttaatgccatcacagaggca
tttgatgtgactgatcagtcaccactgaacacaacaccacccaccccctctatactcact
acttcttcagcttcactacagacaccaaaagctatggaggagccatctgttactgatgct
tctgctaacccctgtgatccaaacccctgtggtcaaggtttatgctctctacaagatggc
attacagtatgtcagtgtcattcaggattcagtgggggaaactgctcaacactggtacag
ggatgtgctgaggggtggatggagttcatgggcagctgttatatccattttgatgagcgt
gagacctggaccagtgctgagcagcactgtcaagagctaaactctcacctggttagcata
tcctcccaagaagaacaagagtttgtaaaaactcaagttcacgactatcagtggattgga
ctaaatgacaaggatgtgcaaaatcagtttcgttggacagatggaagccctttggaatat
gaaaactggagacccaatcagccagacaattacttcagcacaggagaagactgtgttgta
atgatatggcatgaggatggcaagtggaatgatgtaccctgcaactatcatcttcctttt
acttgcaagagtggacctgtcacatgttcatcacctcctgaagtgaagaatgccaggatg
ttaggcaacagcaaagatcgctaccctgttaattccatcattcgataccagtgtgacagt
ggattcacacagcgccacctttcagtggtgcattgcttacctgatggtcagtggcaggag
cctaaagtggaatgtataggaggcaaaataatcgacaagctccagaaaagatccctcaag
acacatcctaaagcagtctatagtcggacgtggacgaaggtcctctaa
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