Sinocyclocheilus grahami (golden-line barbel): 107574657
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Entry
107574657 CDS
T04918
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04260
Cardiac muscle contraction
sgh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107574657
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107574657
04261 Adrenergic signaling in cardiomyocytes
107574657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107574657
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107574657
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA
VWA_2
dCache_1
CobT_C
VWA_CoxE
DUF5017
Motif
Other DBs
NCBI-GeneID:
107574657
NCBI-ProteinID:
XP_016116585
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MEVSGMDVGFYSSYWSSGFSGPSSHDFTIQMWPLRTEVSIMCHIRGSSWVTFFMVYTGWL
CIFTHAQMKIPPETVQKWAITLSEQINAIASKYSGAALLQKKLKDVEPIIRIEDVDGARL
VQDFADEIERMLGSKMKSVKRLADTAEDADLYHEYNASLQFDYFNALLVNTMDEEGNFIE
LGGEFPLEENEHFNKLSVNTLMSDIQVPTNVYNKDPDILNGVYMSEALNDIFINNFQKDP
TLTWQYFGSSAGFFRLYPGIKWTPDANGVVSFDCRNRNWYIQAATSPKDIVIVVDVSGSM
KGLKMTIAKHTINTILDTLGENDFVNVIAYTDYVRYVEPCFKGTLVQADLDNREHFKLLV
EELHVKGEAKVKKAMKESFRILADARANGQGSLCNQAIMLITDGAMEDFQSVFEEFNWPD
KKVRVFTYLIGRDMTFSENVKWIACNNKGYYTHISTLADVQENVMEYLHVLSRPMVINHD
HDIIWTEAYMDSVLPNTKELFKSKAHSLLLMTSVAMPVFSKKKETLSHGILLGVVGTDVP
LLEVMKLAPRYKLGAHGYAFLITNNGYILAHPDLRPLYSDGKKLKPKPNYNSVDLSEAEW
EDTEDSLRTAMVKGETGTLNLDVRAAVDKGKRPVFLKNDYFYTTINETPFSFGMVLTRGH
GQYVFFGNVSVEEGLHDLQQPDLTIADEWTYCETDIDPHHRKLTQLQAVVRYLTGKEPDL
ECDEILLQQVLFDAVVTAPLEAYWTALTLTAPGVDEGMESAFLGTRSGLMRVIRYAGSEK
RVGKKFLTPVDKENLFTVDHFPIWYRLAAENKPGQFFFYVPHDEINKGKNTFVAVTSVTV
TEGKRTAIAGAIGMQASMDLLERVFMSIAKQPNNTDCSDVDGICPLSCESIDVNCYLVDN
NGFIMVSKEKGDVGKFFGEIDGSVMAQLLKSGLFKRVTLYDYQAMCKNAHHHASGARPLL
SPFYGLLAIIKWFFSHFVMLLLEFNICGLWHNDYVVDAKAGFHATHRQKKVELMQPCNTE
YPGFMYDTSIRETNSIIKCGRCQKMFVLQQVPNSNLVMLVVQADCDCSRQYAPITLAPRE
VKYNATVKCNRMKSQKIRRRPESCHAYHPHENAKDCGGACGIAVSLTLYLICLATSLALR
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgagtggaatggacgttgggttttattcgtcctactggagtagtggattctca
ggaccttcttctcatgacttcaccatacagatgtggcccttgagaacagaagtcagcatc
atgtgtcacataagagggtcttcttgggtcacattctttatggtctacacaggctggctg
tgtatctttacacatgctcaaatgaagattccacctgaaacggttcagaaatgggccatc
accctttcagagcaaatcaatgcaattgcatcaaaatattcaggagctgcgctattacaa
aagaaactcaaagatgttgagcccatcatcagaatagaggatgtggatggagcacgatta
gtgcaggactttgcagatgaaatcgaaagaatgcttggcagcaagatgaagtctgtgaag
aggctcgctgatacagctgaggacgctgacctgtatcatgagtataatgcatctttacag
tttgactactttaatgcattattggtgaatactatggatgaagagggaaatttcattgaa
cttggaggcgaatttccattggaggagaatgaacatttcaacaagctttcagtgaacact
ttaatgagcgacatccaagttccaactaatgtctacaacaaagatccagacattcttaat
ggagtgtacatgtcagaagcattgaatgatatcttcatcaataacttccagaaggatccc
acgctcacttggcaatattttggcagctcagctggcttcttcagactctatccaggaatt
aaatggacccctgatgctaatggcgtagtttcttttgactgcagaaacagaaattggtat
atccaggctgccacctctcctaaggacatcgtcattgtagttgatgtcagcggcagtatg
aagggtctgaaaatgaccattgccaaacacaccatcaacactatcctggacacgctcggg
gaaaatgactttgttaatgttattgcatacactgattatgtccgctatgtggagccctgt
tttaagggaacgttggtacaggcagacttggacaaccgcgagcatttcaagctgcttgtt
gaagaactccatgtgaagggagaggctaaagtaaaaaaagccatgaaggagtcgttccgt
atcctcgctgacgccagagcaaatggtcagggcagcctatgtaaccaagcaattatgctg
atcacagacggagccatggaagatttccaatcagtgtttgaagagttcaactggcctgac
aagaaggtacgggttttcacttaccttattggcagagatatgaccttctcagaaaacgtc
aaatggattgcctgcaacaataagggttattatactcacatctctacactggctgatgta
caggagaatgtcatggagtatcttcatgttctgagtcgaccaatggtcatcaaccatgac
catgacataatctggaccgaggcgtatatggacagtgtgcttcctaacactaaggagctg
ttcaaaagcaaagctcacagtcttctgctcatgacgtcagtggccatgccagtgttcagt
aagaagaaagaaacactttctcatggcattctgctaggagtggtgggaactgacgtcccc
ctgctggaggtcatgaaacttgccccgcgatataagcttggagcacatggttatgccttc
ctcatcacaaacaatggatacatcctggcacatcctgatttaagaccactgtacagtgat
gggaagaagttgaaacccaagcccaactacaacagtgtggatctgtcagaggctgagtgg
gaggacactgaggacagtttgagaacagccatggtgaagggagaaactggcactctgaat
ttagatgtgagagcagctgtggacaaagggaaaaggcctgtgttcctcaaaaatgattat
ttctacacaaccatcaatgaaactccatttagctttgggatggtgcttacaagaggtcat
ggacagtacgtgttctttgggaatgtttccgtggaggagggtcttcatgaccttcagcag
ccagacctcactatagcagatgaatggacgtattgtgagacagatattgacccacaccac
cgtaagctcactcagctccaggctgtggtccgatacctgactgggaaagagccggacttg
gagtgtgacgagatacttcttcagcaagttcttttcgatgcagtggtaacagctccactg
gaggcctactggacagcgctaacgctaaccgccccaggcgtagatgaaggcatggagtca
gctttcctgggaacccgctctgggctcatgcgtgtgatcagatatgcaggaagtgagaaa
cgtgttggaaagaagttcttgacccctgtggacaaagagaacctcttcacagtggaccac
tttcccatttggtatcgcctggcagctgagaacaaacctggtcaattcttcttctatgtc
cctcatgatgaaataaacaaaggcaagaacacttttgtggcggtaacatctgtgacggtt
actgaagggaagcgaacagctattgctggagctattggaatgcaggcatccatggacctg
ctggagagagtgttcatgtctattgccaaacaaccaaacaacacagattgcagtgatgtg
gatggtatatgtcctctcagctgtgagagcatcgatgtgaactgttatcttgttgacaat
aatggcttcataatggtctcaaaggaaaaaggagatgttggtaaattcttcggggaaata
gatggatcagtcatggcccaattactaaaatctggcttgtttaaaagggtgactctgtat
gactaccaggccatgtgtaagaacgcccatcatcacgctagtggagctcgaccactgctc
agccctttctacggtctgctggcaataataaaatggttcttctcacattttgtgatgtta
ctgttggagttcaacatctgcggactttggcataatgactatgtagtggatgctaaagct
gggtttcatgcgactcacagacagaagaaagtggaactaatgcagccttgtaacacagaa
tatcctggcttcatgtatgacacgtccatcagagaaaccaacagcatcatcaaatgtggc
cgttgtcagaagatgtttgtcctacagcaggttcctaacagtaacctggtcatgctggtg
gtccaggccgactgcgactgctcccgacagtacgctcccattacactcgcgcccagagaa
gtcaaatataatgccacggttaagtgcaacaggatgaaatctcagaagattcgcagacga
ccggagtcatgtcatgcataccatcctcatgaaaatgccaaggattgtggtggagcatgt
gggatagcagtatctctcacactctacttaatatgtttggccacttcattggctctccgc
tga
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