Scomber japonicus (chub mackerel): 128381060
Help
Entry
128381060 CDS
T09718
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128381060 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128381060 (raraa)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128381060 (raraa)
Nuclear receptors [BR:
sjo03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
128381060 (raraa)
BRITE hierarchy
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128381060
NCBI-ProteinID:
XP_053196982
LinkDB
All DBs
Position
20:17915016..17994735
Genome browser
AA seq
455 aa
AA seq
DB search
MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKEEKKQECTESYVL
SPDTEQMIDRVRKAHQETFPSLCQLGKYTTTNSSERRVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDVLQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGGRTSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagtgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgcttgatcccagagaaaggactggtgcccgga
gcgccccatccctacagcacgtccatcaggaaccagcactggaacggctccaaccactcg
atagagacccagagtaccagctcagaggagatagtgccaagcccgccctcacctcccccg
ccgccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggcttctttcggagaagcatccagaaaaacatg
gtgtacacttgtcaccgggagaagaactgcatcatcaacaaagtcacccgaaaccgctgc
cagtactgtcggctgcagaagtgcctggaagtcgggatgtccaaggagtcggtgaggaat
gaccggaacaagaagaagaaggaagagaagaagcaggagtgcacagagagctacgtgctg
agtcctgacacagagcagatgatcgacagggttcgcaaggcacatcaggagactttcccc
tctctctgccagctgggcaaatacactacgactaacagctcagaacgacgtgtatccctg
gacgtagacctgtgggacaagttcagtgaactctccaccaagtgcatcataaagacggtg
gagtttgctaagcagctgcccggcttcacaacgctcaccatcgctgaccagatcaccctg
ctcaaagccgcctgtctggacattctgatactgcggatctgtacacgctacacaccagag
caggacaccatgactttctcagatggactcacgctaaaccgaacccagatgcacaacgcc
ggctttggtccccttaccgacctggtgtttgccttcgccaaccagctcctccccctggag
atggacgatgcagagacagggttgctcagcgccatctgtttgttgtgtggagaccgtcaa
gacttagaagaggcagataaggtggatgtcctgcaagagccccttctggaggcgctgaag
atttatgtgaggaagaggaggccccacaaaccacacatgttccccaagatgctgatgaag
atcactgatctgagaagcatcagtgctaaaggagctgagcgagtcatcaccctgaagatg
gaaatccctggctccatgcctcctctcatccaggagatgctggagaactcagaaggtctg
gaaagcggggccgcaggaggccggaccagtggtgcacccccaggcagttgcagccccagt
ttgtcccccagctctgcccaaagcagtccagccacacaatcgccgtag
DBGET
integrated database retrieval system
