Sinocyclocheilus rhinocerous: 107716619
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Entry
107716619 CDS
T04916
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04010
MAPK signaling pathway
srx04260
Cardiac muscle contraction
srx04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107716619
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107716619
04261 Adrenergic signaling in cardiomyocytes
107716619
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107716619
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107716619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA
dCache_1
VWA_2
CobT_C
VWA_CoxE
DUF5017
Motif
Other DBs
NCBI-GeneID:
107716619
NCBI-ProteinID:
XP_016378601
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MEVSGLDVGFYSSYWSSGFSGPSSHDFTIQMWPLRTEVSIMCHIRGSSWVTFFMVYTGWL
CIFTHAQMKIPPETVQKWAITLSEQINAIASKYSGAALLQKKLKDVEPIIRIEDVDGARL
VQDFADEIERMLGSKMKSVKRLADTAEDADLYHEYNASLQFDYFNALLVNTMDEEGNLIE
LGGEFPLEENEHFNKLSVNILMSDIQVPTNVYNKDPDILNGVYMSEALNDIFINNFQKDP
TLTWQYFGSSTGFFRLYPGIKWTPDANGVVSFDCRNRNWYIQAATSPKDIVIVIDVSGSM
KGLKMTIAKHTINTILDTLGENDFVNVIAYTDYVRYVEPCFKGTLVQADLDNREHFKLLV
EELHVKGEAKVKKAMKESFRILADARANGQGSLCNQAIMLITDGAMEDFQSVFEEFNWPD
KKVRVFTYLIGRDMTFSENVKWIACNNKGYYTHISTLADVQENVMEYLHVLSRPMVINHD
HDIIWTEAYMDSVLPNTKELFKSNAHSLLLMTSVAMPVFSKKKETLSHGILLGVVGTDVP
LLEVMKLAPRYKLGAHGYAFLITNNGYILAHPDLRPLYSDGKKLKPKPNYNSVDLSEAEW
EDTEDSLRTAMVKGETGTLNLDVRAAVDKGKRPVFLKNDYFYTTINETPFSFGMVLTRGH
GQYVFFGNVSVEEGLHDLQQPDLTIADEWMYCETDIDPHHRKLTQLQAVVRYLTGKEPDL
ECDEILLQQVLFDAVVTAPLEAYWTALMLTAPGVDEGMESAFLGTRSGLMRVIRYAGSEK
RVGKKFLTPVDKENLFTVDHFPIWYRLAAENKPGQFFFYVPHDDINKGKNTFVAVTSVTV
TEGKRTAVAGAIGMQASLDLLERVFMSIAKQPNNTDCNDVDGICPLSCESIDVNCYLVDN
NGFIMVSKEKGDVGKFFGEIDGSVMAQLLKSGLFKRVTLYDYQAMCKNAHHHASGARPLL
SPFYGVLALVKWFFSHFVMFLLEFNICGLWHNDYVVDAKAGFHATHRQKKVELMQPCNTE
YPGFMYDTSIRETNSIIKCGRCQKMFVLQQVPNSNLVMLVVQADCDCSRQYAPITLAPRE
VKYNATVKCNRMKSQKIRRRPESCHAYHPHCQ
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgagtggattggacgttgggttttattcgtcctactggagtagtggattctca
ggaccttcttctcatgacttcaccatacagatgtggcccttgagaacagaagtcagcatc
atgtgtcacataagagggtcttcttgggtcacattctttatggtctacacaggctggctg
tgtatctttacacatgctcaaatgaagattccacctgaaacggttcaaaaatgggccatc
accctttcagagcaaatcaatgcaattgcatcaaaatattcaggagctgcgctattacaa
aagaaactcaaagatgttgagcccatcatcagaatagaggatgtggatggagcacgttta
gtgcaggactttgcagatgaaatcgaaagaatgcttggcagcaagatgaagtctgtgaag
aggctcgctgacacagctgaggacgctgacctgtatcatgagtataatgcatctttacag
tttgactactttaatgcattattggtgaatactatggatgaagagggaaatttaattgaa
cttggaggcgaatttccattggaggagaatgaacatttcaacaagctttcagtgaacatt
ttaatgagcgacatccaagttccaactaatgtctacaacaaagatccagacattcttaat
ggagtgtacatgtcagaagcattgaatgatatcttcatcaataacttccagaaggatccc
acgctcacttggcaatattttggcagctcaactggcttcttcagactctatccaggaatt
aaatggacccctgatgctaatggcgtagtttcttttgactgcagaaacagaaattggtat
atccaggctgccacctctcctaaggacatcgtcattgtaattgatgtcagcggcagtatg
aagggtctgaaaatgaccattgccaaacacaccatcaacactatcctggacacgctcggg
gaaaatgactttgtcaatgttattgcatacactgattatgtccgctacgtggagccctgt
tttaagggaacgttggtacaggcagacttggacaaccgcgagcatttcaagctgcttgtt
gaagaactccatgtgaagggagaggctaaagtaaaaaaagccatgaaggagtcgttccgt
atcctcgctgacgccagagcaaatggtcagggcagcctatgtaaccaagcaattatgctg
atcacagacggagccatggaagatttccaatcagtgtttgaagagttcaactggcctgac
aagaaggtacgggttttcacttaccttattggcagagatatgaccttctcagaaaacgtc
aaatggattgcctgcaacaataagggttattatactcacatctctacactggctgacgta
caggagaatgtcatggagtatcttcatgttctgagtcgaccaatggtcatcaaccatgac
catgacataatctggaccgaggcgtatatggacagtgtgcttcctaacactaaggagctg
ttcaaaagcaatgctcacagtcttctgctcatgacgtcagtggccatgccagtgttcagt
aagaagaaagaaacactttctcatggcattctgctaggagtggtgggaactgacgtcccc
ctgctggaggtcatgaaacttgccccgcgatataagcttggagcacatggttatgccttc
ctcatcacaaacaatggatacatcctggcacatcctgatttaagaccactgtacagtgat
gggaagaagttgaaacccaagcccaactacaacagtgtggatctgtcagaggctgagtgg
gaggacactgaggacagtttgagaacagccatggtgaagggagaaactggcactctgaat
ttagatgtgagagcagctgtggacaaagggaaaaggcctgtgttcctcaaaaatgattat
ttctacacaaccatcaatgaaactccgtttagctttgggatggtgcttacaagaggtcat
ggacagtatgtgttctttgggaatgtttccgtggaggagggtcttcatgaccttcagcag
ccagacctcactatagcagatgaatggatgtattgtgagacagatattgacccacaccac
cgtaagctcactcagctccaggctgtggtccgatacctgactgggaaagagccggacttg
gagtgtgacgagatacttcttcagcaagttcttttcgatgcagtggtaaccgctccactg
gaggcctactggaccgcgctaatgctaaccgccccaggcgtagatgaaggcatggagtcg
gctttcctgggaacccgctctgggctcatgcgtgtgatcagatatgcaggaagtgagaaa
cgtgttggaaagaagttcttgacccctgtggacaaagagaacctcttcacagtggaccac
tttcccatttggtatcgcctggcagctgagaacaaacctggtcaattcttcttctatgtc
cctcatgatgatataaacaaaggcaagaacacttttgtggcggtaacatctgtgacggtt
actgaagggaagagaacagctgttgctggagctattggaatgcaggcatccctggacctg
ctggagagagtgttcatgtctattgccaaacaaccaaacaacacagattgcaatgatgtg
gacggtatatgtcctctcagctgtgagagcatcgatgtgaactgttatcttgttgacaat
aatggcttcataatggtctcaaaggaaaaaggagatgttggtaaattcttcggggaaata
gatggatcagtcatggcccaattactaaaatctggcttgtttaaaagggtgactctgtat
gactaccaggccatgtgtaagaatgcccatcatcacgctagtggagctcgaccactgctc
agccctttctatggtgtgctggcattagtaaagtggttcttctcacattttgtgatgttt
ctgttggagttcaacatctgcggactttggcataatgactatgtagtggatgctaaagct
gggtttcatgcgactcacagacagaagaaagtggaactaatgcagccttgtaacacagaa
tatcctggcttcatgtatgacacgtccatcagagagaccaacagcatcatcaaatgtggc
cgttgtcagaagatgtttgtcctacagcaggttcctaacagtaacctggtcatgctggtg
gtccaggccgactgcgactgctcccgacagtacgctcccattacactcgcgcccagagag
gtcaaatataatgccacggttaagtgcaacaggatgaaatctcagaagattcgcagacga
ccagagtcatgtcacgcataccatcctcattgccaataa
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