Solea senegalensis (Senegalese sole): 122759262
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Entry
122759262 CDS
T07721
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122759262 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssen03310
]
122759262 (raraa)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122759262 (raraa)
Nuclear receptors [BR:
ssen03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
122759262 (raraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122759262
NCBI-ProteinID:
XP_043869919
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Position
LG18 :complement(2722932..2803394)
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AA seq
454 aa
AA seq
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MYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSASIRNQHWNGSNHSI
ETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMV
YTCHREKNCIINKVTRNRCQYCRLQKCLDVGMSKESVRNDRNKKKKDEKKQECTESYVLS
PDTEQMIDKVRKAHKETFPSLCQLGKYTTSNSSERRVSLDVDLWDKFSELSTKCIIKTVE
FAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAG
FGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQAEKVDVLQEPLLEALKI
YVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLE
SGAAGGRPTGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagagtgtggacgttgtgggactgaatcccagcccgaacccgtttttaatgatg
gattactacaaccagagcagaggatgtttgatcccggagaaaggactggtgcccggagcg
cctcatccctacagcgcgtccatcaggaaccagcactggaacggctccaatcactcgata
gagacccagagtaccagctcagaggagatagtgccaagtccgccctcgcctccccctccg
ccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactatggt
gtcagcgcctgcgagggctgcaagggcttcttccggcgaagcatccagaagaacatggtg
tacacgtgtcaccgggagaagaactgcatcatcaacaaagtcacgcgcaaccgctgccag
tactgccggctgcagaagtgcctggacgtcgggatgtcgaaagagtcagtgaggaacgac
cggaacaagaagaagaaggacgagaagaagcaggagtgcacggagagctacgtcctgagt
ccagacacggagcagatgatagacaaggttcgcaaggcgcacaaggaaaccttcccctct
ctctgccagctgggcaaatacactacgtctaacagctcagagcgacgcgtgtccttggac
gtggacctgtgggacaaattcagcgaactttccaccaagtgcatcatcaagacggtggag
tttgcgaagcagctgcccggcttcacgacgctcaccatcgccgaccagatcacgctcctc
aaagctgcttgtctcgacatcctgatactgcggatctgcacgcgctacacgccggagcag
gacaccatgacgttctcagacggactcacgctaaaccgaacccagatgcacaacgcaggc
ttcggtcccctcacagacctggttttcgcctttgccaaccaactccttcctctggaaatg
gacgacgcagagacggggctgcttagcgccatctgtttgctgtgtggagatcgtcaggac
ttggaacaggcggagaaggtggacgttctgcaggagcctcttctggaggcgctgaaaatt
tatgtacggaagaggaggccgcacaaaccgcacatgttccccaagatgctgatgaagatc
accgatctgagaagcatcagcgctaaaggagccgagcgcgtcatcaccctgaagatggag
atccctggatccatgccccctctcatccaggagatgctggagaactcggaaggcctggag
agtggtgcggcgggcgggcggccgaccggcgcccccccgggcagctgcagccccagtctg
tcccccagctcggcccaaagcagtccagccacacaatcgccatag
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