Solea senegalensis (Senegalese sole): 122769693 Help Entry 122769693         CDS       T07721                                  Symbol ptch1 Name (RefSeq) protein patched homolog 1   KO K06225   patched 1 Organism ssen  Solea senegalensis (Senegalese sole) Pathway ssen04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:ssen00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     122769693 (ptch1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Patched Sterol-sensing Motif Other DBs NCBI-GeneID:  122769693 NCBI-ProteinID:  XP_043882375 LinkDB All DBs Position LG5:complement(12148127..12195857) Genome browser AA seq 1558 aa AA seqDB search MASAANAPSEQENRDPDRPRVTRRNRGDYSRSTPLDLEYLQRPSYCDAGFALEQISEGKA TGRKAPLWLRAKFQRLLFRLGCYIQKNCGKFLVVGLMIFGAFAVGLRAANLETDVEKLWV EVGGRVNQELRYTRQKMGEEAMFNPQLMIQTPREEGASVLTVDALLQHLESALRASRVHV YLYNRQWKLEHLCYKSGELVTEMNYVNEIIERLHPCLIITPLDCFWEGAKLQSGMAYLPG KGPLQWTNFDPKDFLEDLGQRQNYPVEAFVDMLEKADVGHGYMDRPCLNPTDPDCPLTAP NKNSTKPFDVARTLSGGCYGLSRKYMHWQEELIVGGTTKNGSGPLLSAQALQTMFQLMTP KQMFEHFRGYEEVSHINWNEEKAAAILEAWQRKYSEAVLLSVAANSSQKVLSFTTTTLED ILKSFSDISVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVTLSVAAGLGLCS LLGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVA LTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRFD IFCCFYSPCANRVIQIEPQAYLDGADGSRYSPPPSYRTPPPSYQTPPPSYSSPPPSYSSH GFAQQTEITMQSTVQLRTEYDPRTQAFYTTAEPRSQISVQPINPAPMRSNPNDYYSSNTN GSRSSSGNLNNNNSGSRNNGGSRGSATFPHHYPVPPPAASTSTACSVPQSDTVSPTGQIP ENSSSTRNLLSQFGEASLGLHCFEPPCSRWTLASFAEKHYAPFLLQPTTKVVVIVLFLCL LGVSLYGTTQVRDGLELTDIVPRETSEYDFIGAQFKFFSFYNMYVVTQRADYAHIQLLLH QLHQRFHTVRYVLKEDNGQLPYMWLHYFRDWLQGLQQTFDKDWEAGRITLNSYRNGSDDG ILAYKLLVQTGRREKPINFNLLTRQRLVDADGIINPGAFYIYLTAWVSNDPVAYAASQAN IRPHPPEWLHDRTDSMPETRLNIPAAEPIEYAQFPFYLNGLRETPQFVEAIESVRAICSN YSRQGLPSYPNGYPFLFWEQYVSLRHWLLLSISLVLACTFLVCALFLLNPWTAGIIVLVL SLMTVELFGFMGLMGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDRHKRAVLALE HMFAPVLDGAFSTLLGVLMLAGSEFDFIVRYFFAVLAILTVLGVLNGLVLLPVLLSYFGP YPEVSPVDGRSRLPTPSPEAPPHVVHFSVRPHHTTTATTTSGAASDSSDSEYSSNTTASG VSQELQNYNLPSRRGATRVEEQQYHVQTSRGRAVRPEEGRRGSGYRRSVRQPDPLTYTMS SGCESGPQLEAAQRISSRNPKSQLHWQVPPPAHPRMDAFETATEAGGHYGSHSHREHSAG HRAHAAHNPPPNQHLPHHHPNPTPYCQPITTVTASASVTVAVHPGPLSNQSPPTSSYPGY TATDSYCRSRAEMSGAAFQDPHVPSDTQTGVRGVTVETMELQDLEFEAAESDHCRRAS NT seq 4677 nt NT seq  +upstreamnt  +downstreamnt atggcctcggctgctaatgcgccctccgagcaggaaaacagagaccccgatcggccgaga gtaacgcggaggaacaggggggactactcccgcagcacgccgctggatttggagtatttg cagcggccgagttactgcgatgccggctttgctttggagcaaatatcagaggggaaggcg actgggagaaaagcacctctgtggctgagagcaaagttccagagacttttatttaggctg ggctgttacatacaaaagaactgcggaaagtttttggttgtcggcctcatgattttcgga gctttcgctgtcggcttaagagccgcaaatttggagacggacgtggagaaactctgggtg gaagttggcgggcgtgtgaaccaggaactgaggtacacacggcagaagatgggcgaggag gccatgtttaatcctcagctgatgatccagacaccgcgggaagagggtgccagtgtacta acagtggatgcgctcctgcagcacctggagtcagctctcagagccagtagagttcatgtt tacctttataacagacaatggaaattagaacatttatgctacaaatcaggagaattagtg accgaaatgaattatgtgaacgagatcatagaaaggctacatccctgcctcatcatcacc cctttggactgtttctgggaaggagccaagctccaatctggaatggcctatctcccaggt aaaggcccccttcagtggactaactttgaccccaaggacttccttgaggacttggggcaa aggcaaaattaccctgtggaagcctttgtggacatgttggaaaaggcagacgttgggcat ggctacatggatagaccctgtctgaaccctactgaccctgactgtcctctcaccgcaccc aataagaactccactaagccgtttgatgtggcgcggaccctgagtggcggctgctatggt ctgtccaggaagtacatgcactggcaggaggaactgatcgtaggagggaccaccaagaac ggcagtggacccctactcagtgcccaggccttacagaccatgttccagctgatgactccc aagcagatgtttgagcactttcgtggctatgaagaggtttcccacatcaactggaatgaa gaaaaggctgcagctatactggaagcctggcagaggaaatactctgaggcggtgctgcta agtgtggcagcaaattcttcccagaaggtcttgtctttcaccacaaccactctggaagat attctcaagtctttctcggacatcagtgtcatccgtgtggccagtggatacctgctcatg ctggcctatgcgtgtctgaccatgctgcggtgggactgtgctaagtctcagggagctgtg gggttggcgggcgtcctgctggtgacactgtctgtggcagcaggtctgggcctctgctct ctcctaggaatctctttcaatgcagcaaccacacaggtgttacccttcttggctctggga gttggagtggatgacgtcttcctcctcgctcatgccttcagtgagaccggacagaacaag aggataccatttgaggaccgtacaggggagtgtctgaagaggacaggggccagtgtggct ctcacctccatcagtaacgtcactgcgttcttcatggcagccctcatccccatcccagca ctcagagccttttctctacaggctgcagtggttgtggtgtttaactttgccatggtgctg ctcatctttcccgccatcctcagcatggacctctaccgccgagaagaccgacgtttcgac atcttctgctgcttctacagcccgtgtgccaatcgtgtcatccagatcgagcctcaagct tacctggatggagcagacggcagtcgttacagccctcccccatcctatcgcacgccacct ccttcatatcaaactccaccacccagttacagcagccctccgccctcctacagcagccat ggctttgcccagcagactgaaatcaccatgcaatctacagtgcagctcaggacagagtat gaccctcgaactcaggctttctacaccacagctgagcccagatcccagatctccgtgcaa cccattaatccagctccgatgaggagcaaccctaatgactattacagcagcaacaccaac ggcagcaggagcagcagtggcaatctcaataacaacaacagtgggagtagaaataatggt ggatctcgaggttcggccactttcccccatcactaccctgtgcctcctcctgcagcttca acttcaactgcttgttcagttcctcagagcgacacagtgtcaccgactggtcagatccca gagaacagcagctccacacggaacctgttgtcccagtttggagaagcctcgctgggcctg cactgcttcgagcctccctgctcccgctggaccctggcttcttttgctgagaagcactat gctccttttctcctgcagccaaccaccaaggtggttgtaattgtgctgttcctctgcctg ctgggagtcagtttgtacgggaccacccaggtaagagacggcctggagttgaccgacatc gtacccagagagaccagcgagtacgacttcatcggtgcccagttcaagttcttctccttc tacaacatgtacgtggtgacgcagcgggctgattatgcccacatccaactactgctgcac cagcttcatcagaggttccacactgttcgctatgtgttgaaggaggacaacgggcagctg ccctatatgtggcttcactacttcagggactggcttcagggtcttcagcagacatttgac aaggactgggaggctggtcgcatcaccctgaacagttacaggaatggttctgatgatggc atcctggcatacaagcttttggtgcagacaggacgcagagaaaagcccatcaatttcaac ttgttgactcgtcagaggcttgttgatgcggatggaatcatcaaccctggggctttttac atctacctgaccgcctgggtcagcaatgatcccgtggcatatgctgcctcgcaggccaac attcggccacaccctccggagtggctccatgaccgtaccgactccatgcctgagacacgc ctcaacatcccggctgccgagcctatcgaatacgcacagttccccttctacctcaacggg ctccgcgagacgccacaatttgtggaggccatcgaaagcgtgagggctatttgcagcaac tacagccgccaaggcctgccctcctaccccaacggctacccttttctgttctgggaacag tatgttagtctgcgccactggctcctgctgtctatcagtctggtgctcgcctgtaccttc ctggtgtgtgccctcttcttgctcaacccatggactgccggtatcatagtgttggtgctg tccctcatgaccgtggagctgtttggcttcatggggctgatgggaatcaagctgagtgcc gtccccgtggtgattctcatcgcctctgtcggcatcggggtggagttcacagtccatgtg gccctggcgttcctgactgccataggggatcgtcacaagcgggcagtgctggcactggag cacatgtttgctccagtgctcgacggagccttttccaccttgttgggagtcctgatgctc gcaggctctgagtttgacttcattgtcaggtacttctttgctgtgttggccatcctcaca gtcttgggtgtcctgaatggattggtcctcctcccagtattattatcatactttgggcct tatccagaggtatcaccagttgatggtcgtagtcggttgcccaccccatccccagaggcc ccgccacatgtggtccacttctcagtccgtcctcaccacaccaccacggccaccaccacc tctggtgcagcttcagactcgtctgactcggaatacagctctaacacaacagcgtctggt gtcagccaggagctgcagaactacaacctgccctcacgcagaggagcgactcgtgtggag gagcagcagtaccatgtccagaccagcagaggcagagcagtcaggccagaggagggaagg agaggctcagggtataggcgatcagtcagacagcctgaccctctaacctatactatgtct tcgggttgtgagtcggggccccagctggaagctgcccagcgaatcagcagcaggaacccc aaaagtcagctgcactggcaggtgccacccccagcccacccgcgcatggacgcttttgaa actgctactgaggctgggggccattatggctcacacagccacagagaacactcagcaggc cacagagcccatgctgcccacaacccaccacctaatcagcacctcccacaccaccaccct aaccccactccatattgtcaacccatcaccacggtgaccgcatcagcctcggtcactgtt gccgtgcacccgggtcccttatccaaccagagtcctcccacttcctcttacccaggatac actgcaacagacagttactgccgctcaagagcagagatgtcgggggctgctttccaggac ccgcatgtgccatcggatacccagacgggggtcagaggagttacagtggagaccatggaa ctccaagatttggagtttgaggcagctgaaagcgaccattgcaggcgggctagctga

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