Triplophysa dalaica: 130413824
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Entry
130413824 CDS
T09616
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tdw00535
]
130413824 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
tdw00536
]
130413824 (acanb)
04091 Lectins [BR:
tdw04091
]
130413824 (acanb)
Proteoglycans [BR:
tdw00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
130413824 (acanb)
Glycosaminoglycan binding proteins [BR:
tdw00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
130413824 (acanb)
Lectins [BR:
tdw04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
130413824 (acanb)
BRITE hierarchy
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
I-set
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
130413824
NCBI-ProteinID:
XP_056595273
EnsemblRapid:
ENSTDLG00000026914
LinkDB
All DBs
Position
24:complement(7442567..7453266)
Genome browser
AA seq
1351 aa
AA seq
DB search
MSLTLLLLCSCLSVISGTPVFFGDLADQDSTISVSIPVEQPLRPLLGGSMVIPCYFQDNV
VHDPGATTISPLAHRIKWSYIYKGTISLILVATGGLVKVEGDYLDRVHMVNYPMVPSDAT
IEISELRSKDSGIYRCEIMQGIEDNYDSVEMQVQGILFHYRAISTRYTLTFETAKAACIQ
NSAVIATPAQLQAAFDDGFHQCDAGWLSDQTVRYPIHEPREPCYGDKENFPGVRTYGVRD
VNETYDVYCFADKMSGKVFYSFSVEKFTFPEAEEQCAKLGAQLATTGQLYLAWMTGMDVC
NAGWLADRSVRYPINTRRPQCGGGLLGVRTVYLFPNQTGYPHPDSRYDAICYREQEDKVS
ETSPFPEIYTSTDSGFTVATVTLNPLDYTQQVTTNGEARGETEETLNITSTEDPLSVSPN
ITETSSLVEEEVIRVVTAKPDLGSDITKENVTSVYPIVPPLSVDMSGSGSASGHPDHSSG
DVSGSGSASGHPDHSSGDASGSGSASGHPDHSSGDASGSGSASGHPGFSSGDASGSGSAS
GHPGFSSGDASGSGSAPVHPGSSSGDASGSGSASGHPGFSSGDASGQGSASGHPDFSSGD
VSGSGSTSGQLDLGSGDVSGFGSASGLSSGDISGLGSASGKLDPTFGEISGSSSGSGFHA
FSSGDISGSGFPQFSSGDMSGSGRPSGDISGSGQSGDESGFLVQFREGVDTLILGTSGSG
SAQEAKEGSGVFIIQRLESGDWESGEPSGSSASGLPSGLGSGISISGVSGLSSGLWSEVS
GSGASGLASGLNIEVSGSGASRLDSEVSGSGASGLPSGLWSELSGSGASGLPSGLNIEVS
GSGASRLDSEVSGSGSSGLPSGLWSEVSGSGASGLPSGLNSEISGLGTSDLLSGFGNVII
GSGSSKIHSGAELSGSGLFGVSFLDTEIIDLTARPSGEQELSGVSPFSLNYVSGSGSHSS
ASGSGGISDHFERINEKIIILTDDEIIEFVSGPTTRTEQGRGSVEVSGEGSGQEHSADDI
SGSSYRNSYEHHLISRGTDYLLPEKNEQLSSATEAFDNTDQSPVETTVSTISDFITSPSV
SLQTPESIVEPTVTDAFANPCEPNPCGDGFCSIQHGIVVCQCPRGFSGENCSISIQGCAE
GWMEFMGSCYIHFDERETWAGAEQRCKDLNSHLVSISSKQEQDFVRTQARNYQWIGLSDK
KVENEFHWTDGSILKYKNWRPNQPDNYFNTDEDCVVMVWHEDGQWNDVPCNYHLPFTCKT
GPVTCSSPPEVRNARMLGSPQERYTVNSIIRYECDSGFTQRHLSVVRCMADGQWEQPQVE
CIEGKTINRLRKRSLKTRPKAVKNRTWRKIL
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgactttgcttctgctgtgctcatgcctcagtgtcatttccggcacacctgtg
ttttttggagacttggctgatcaggacagcaccatcagtgtaagcatccctgtagagcag
ccactgcgccccctgctgggtggaagtatggttatcccctgctactttcaagacaacgtt
gtccatgatcctggtgctacaaccatctccccgctcgcccaccgtatcaagtggagctac
atctacaagggcacaataagccttattctggtcgccaccggaggactggtgaaagttgaa
ggggactacttggaccgggttcatatggtaaattaccccatggtgccaagtgacgccacc
attgagatctcagaacttcgttccaaggactctggcatctacaggtgtgagatcatgcaa
ggcattgaagataactatgattctgtggaaatgcaagttcaaggtattttgttccactac
cgagcgatttccacccgatacaccttgacatttgagacagcaaaggctgcctgcattcaa
aacagtgctgttatcgcaactcctgctcagctgcaagcggcctttgatgatggattccat
caatgtgatgctggctggctctcagatcaaactgtgaggtatcccattcatgagccaaga
gagccttgctatggagacaaagaaaactttccaggtgtaagaacatatggagtccgagat
gtcaatgagacctatgatgtctactgctttgcagacaaaatgtcaggcaaagtgttttac
tccttctctgtggagaagtttacgtttcctgaagctgaagagcaatgtgcaaagctggga
gcccagctggccaccacgggacaactgtacctggcatggatgactggcatggatgtatgt
aatgctggctggctagcagacaggagcgtgcggtaccccattaacacacgccgaccccag
tgcggcggcgggcttctgggagtgcgaactgtttacctgtttccaaatcagactggctac
ccccatccagactcccgctatgatgcaatctgttacagagaacaagaagacaaggtttca
gagacctcaccattccctgaaatatacacttctacagattctgggttcactgtggccaca
gtgactttaaatcctttagattacacacaacaggtgaccacaaatggcgaagcccgtggg
gagactgaagaaactcttaacattaccagtacagaagaccccctatccgtttctccaaac
ataactgagacaagctcactggtagaagaggaagtgatcagagtggttacggctaagcct
gacctgggaagtgatattaccaaagaaaatgtaacctctgtttatccaattgtccctcca
ttgtctgtggacatgtctggatcaggctctgcatcgggtcatccagatcacagttctggg
gatgtatctggatcagggtctgcatctggtcatccagatcacagttctggggatgcctct
ggatcggggtctgcatcgggtcatcctgatcacagttctggggatgcctctggatcgggg
tctgcatcgggtcatcctggtttcagttctggggatgcatctggatcggggtctgcatcg
ggtcatcctggtttcagttctggtgatgcctctggatcggggtctgcaccggttcatcct
ggttcaagctctggggatgcatctggatcagggtctgcatcgggtcatcctggtttcagt
tctggagatgcatctggacaaggctctgcatcaggtcatcctgatttcagttctggggat
gtttctggatcaggctcaacatcaggtcaacttgatctcggttctggggatgtctctggc
tttgggtcagcatcaggtctcagttctggggacatatctggattggggtcagcatctggt
aaactcgatccgacttttggagagatatctggatcaagctcaggatcaggctttcatgct
ttcagttccggggacatatcaggatcaggctttcctcaattcagttctggagacatgtct
ggcagtggcaggcccagtggggacatatctggttctggccaaagtggtgatgaatcaggt
tttcttgtgcagttcagagaaggtgtagacacattaattttggggacttctggttcaggt
agtgctcaggaggcaaaagaaggtagtggtgttttcattattcaaagactagaatctggg
gattgggaatccggtgaaccatctgggagttcggctagtggccttccatcgggacttggt
agtggaattagcatttccggagttagtggtctttcatctggactctggagtgaagttagt
ggttcaggagctagtggccttgcatcaggacttaacattgaagttagtggttcaggagca
tccagacttgacagtgaagttagtggttcaggagctagtggccttccatctggtctctgg
agtgaattaagtggttcaggagctagtggccttccgtcaggacttaacattgaagttagt
ggttcaggagcatctagacttgacagtgaagttagtggttcaggatctagtggccttcca
tctggactctggagtgaagttagtggttcaggagctagtggccttccgtcaggactcaac
agtgaaattagtggtttaggaactagtgaccttctatcgggattcggaaatgtaattatc
ggttcaggatcaagcaaaatacacagtggtgctgaactgagtgggtcaggcctctttggt
gtgtcgttcttagacacagaaattattgatctaaccgcaaggccatctggagaacaggaa
ttgtctggcgtttctccatttagcctgaattatgttagtggttctggctctcactcttca
gcttctggttcaggtggcatatcggaccactttgaaagaataaatgaaaagataattatt
ctaacagatgatgagatcattgagtttgtctctgggcctacaactagaacagaacaaggc
cgtggatctgtggaggtcagtggggagggcagtggtcaagaacattcagctgatgacatc
tcaggctcctcttacagaaattcatatgaacatcacttgatttccagaggaacagattat
ctcctaccagaaaaaaatgagcaacttagtagcgccacagaagcgtttgataacactgat
cagtccccagtggaaaccacagtatccaccatctcggatttcatcacttctccttcagtt
tcactacaaacaccagaatctatagtggagcccacagttactgatgcttttgctaacccc
tgtgaaccaaacccctgtggcgatggcttctgctctatacaacatggcattgttgtatgt
cagtgcccacgaggattcagcggggagaattgctcaatatcgatacagggatgtgctgag
gggtggatggagttcatgggcagctgttacatccactttgatgagcgtgagacctgggcc
ggtgctgagcagcgctgtaaagatctaaactctcacttggttagcatatcctccaaacaa
gaacaagactttgtcagaactcaggctcgcaactaccagtggatcggactcagcgacaaa
aaagtggaaaatgagtttcactggactgatggaagcattttgaaatataaaaactggaga
ccaaaccagccagataattactttaacacagatgaagactgtgttgtaatggtatggcat
gaagatggccagtggaatgatgtgccctgcaactaccatctaccctttacttgcaaaact
ggacctgtcacctgttcatcacctcctgaggtgaggaatgcaaggatgctcggcagcccc
caagaacgctacactgttaattcgatcattcggtacgagtgtgacagtggattcacacag
cgccacctttctgtggtgcgatgtatggcggatggccagtgggagcagcctcaggttgaa
tgtatagaaggtaaaacgatcaacagacttcggaagaggtccctcaagacacgtcccaaa
gcagtcaaaaatcggacatggagaaaaatcctctaa
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