Tympanuchus pallidicinctus (lesser prairie-chicken): 128076841
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Entry
128076841 CDS
T08967
Name
(RefSeq) sodium channel protein type 1 subunit alpha-like isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128076841
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128076841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
IQ
Lustrin_cystein
Pol_alpha_B_N
Motif
Other DBs
NCBI-GeneID:
128076841
NCBI-ProteinID:
XP_052531024
LinkDB
All DBs
Position
Unknown
AA seq
2015 aa
AA seq
DB search
MAQAMLVPPGSDCFFYFTKESLAAIEKRIADEKSNRDKDEHKDDGGHEEAQPTPNNDLEA
GKTLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKTIFRFSATSALYLLSPFNVI
RRVAIKILVHSLFSMLIMLTILTNCVFMTWRKLPEWTKNVEYTFTGIYTFEFLVKILARG
FCIDDFTCLRDPWNWLDFVVISFAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSQLNS
TIGENGTLVNSTVTPFDWKGYIEDESHFYFLEGQNDALLCGNSSDAGQCPEGYTCVKAGR
NPNYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLIN
LILAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAVTASAESRE
PSVAGGAGGLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSI
RRKGFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSEND
FADDEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNG
VVSLVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTETEMRKRISGSLHVSMDYLEDPAL
RERAMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPF
VDLAITICIVLNTLFMAMEHYPMTDEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQ
EGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGA
LGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRVLC
GEWIETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDNEM
NNLQIAVARMQKGIDYVKRKVREFIQKAFVKKQKALDEIKPLEDLNNKNSCISNHTAELS
KDHDYIKDVNGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTE
EFSSESDLEESKEKLNMSSSSEGSTVDIGLPAEEQPEAEPEESMEPEACFTEGCVRRFKC
CQVSVEEGRGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTM
LEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGA
IKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAG
KFYYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQVATF
KGWMDIMYAAIDSRDVLQQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKK
KFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIMILI
CLNMVTMMVETDDQSKEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVV
VILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALF
NIGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLA
PILNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGV
ATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKVQLIA
MDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLK
RKQEEVSAVIIQRAFRRHLLKRTVKQASFIYNKNKTEGGAGLGIKDEILLDKLNENSFTE
KTDITASTAVCPPSYDRVTRAVKEKHEKEDKGVQK
NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcaatgctcgtaccaccaggatctgactgcttcttctatttcaccaaagag
tctcttgcagctattgaaaaacgtattgctgatgaaaagtctaatcgtgataaagatgag
cacaaagatgatggtggtcatgaagaagctcagcccacgccaaataatgacttggaggca
ggaaagacgctgccatttatttatggtgatattcctccagaaatggtatctgagcccctg
gaggatttggatccatattatatcaataaaaaaacatttatagtattgaataaagggaag
acaatcttcaggttcagtgccacatctgccttgtaccttttatctcctttcaatgttatt
agaagagtagctattaagattttagttcattcgttgttcagcatgctcattatgctcacg
attttgacaaactgtgtattcatgacatggagaaaacttccagaatggacaaagaatgta
gagtacactttcactggaatttatacttttgaatttctggtaaaaatccttgcgagaggt
ttctgtatagatgattttacttgccttcgtgacccttggaactggcttgattttgttgtc
atttcctttgcgtatataacagagtttgtaaacctaggcaatgtttcagctcttcgaact
ttcagagtattgagagctttgaaaactatttctgtaatcccaggcttgaagactattgtg
ggagccctaattcagtctgtgaagaagctctcggatgttatgatcctgactgtgttttgt
ctgagtgtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgt
ctgcagtggcctccagaaaatttcactctggaaacaaatataacttcccagctcaacagc
accattggtgaaaatggtacactggttaattcaacagtgactccatttgactggaagggg
tacattgaggatgaaagtcatttttattttctggaagggcaaaatgatgctctcctttgt
ggaaacagttctgatgctgggcagtgtccagaaggttacacgtgtgtgaaagctggtaga
aatcccaattatggctacacaagttttgacactttcagctgggctttcttgtcactgttt
cgtttgatgacccaagacttctgggaaaatctttatcagctgacactacgtgctgctggg
aaaacatacatgatattttttgttttggtgatttttctgggctccttctatctgatcaac
ttgatcctggctgtggttgccatggcttacgaagagcagaaccaagcaaccctggaagaa
gcagagcagaaagaggcagaatttcaacaaatgctggaacagctaaagaagcagcaagaa
gcagctcaggcagcagcagtggcagcggcggcagtaacagcatctgcagagtccagggaa
cccagtgtcgcgggaggagcaggtgggctttcagaaagttcctcagaggcttccaaattg
agctcaaagagtgccaaagagaggagaaatagaaggaaaaaaagaaaacagaaagaacag
tctggaggagaggaaaaagatgaagatgaatttcacaagtctgaatcagaagacagcatc
agaagaaaaggtttccggttatctattgaaggcaatagactgacatatgaaaagaaatac
tcttctccacatcagtctttgctgagcattcgtggctccctgttttccccaagacgcaac
agcagaacaagtcttttcagcttcagaggtagagcaaaggatataggatctgaaaatgac
tttgctgatgatgagcacagcacttttgaagacaatgatagcagaagagattctctcttt
gtgccgcgcagacacggtgaacggcgcaacagtaacattagtcaggccagtaggtcatcc
aggatgctggcagtgtttccagtgaatgggaagatgcacagcactgtggattgcaatggg
gtggtttccctggttggtggaccatctgttcctacatcgcctgttggacagcttctgcca
gaggtgataatagataaaccagctactgatgacaatggcaccactacagagacagaaatg
aggaagagaatatcaggctctttgcatgtttctatggactatctggaagatccagcttta
agagagagagcaatgagcattgctagcatccttacaaacactgtggaagaactcgaagaa
tcaagacagaaatgcccaccgtgttggtataaatttgcaaatattttcttgatctgggac
tgcagtcctcattggttaaaagtaaagcatattgtcaacttagttgtaatggatccattt
gttgacctggctattacaatttgcattgttttaaatacactctttatggccatggagcat
tatccgatgactgatgaattcaataacgtactttcagttggaaatctggtcttcactgga
atcttcacagcagagatgtttctcaagataattgcaatggatccttactattattttcaa
gaaggctggaatatttttgatggatttattgtaacccttagcttggttgagcttggtctt
gcagatgtagaagggctctcagttcttcgatcattcagattgttacgagtcttcaaatta
gcaaaatcctggccaactctaaatatgctgattaagattattggcaactcagtgggagct
ctgggaaatttgactctcgttctggccatcattgtgttcatttttgctgttgttgggatg
cagctgtttgggaaaaactataaggaatgtgtctgcaaaatagcaagtgattgtgtactt
ccacgatggcacatgcaagatttttttcactcttttttgatcgtattccgagtgctgtgt
ggagaatggatagaaacaatgtgggactgcatggaggttgcaggccaagcaatgtgcctt
actgtcttcatgatggtcatggtgattggaaacttagtggtactgaacctatttttggcc
ttgctgctgagctcatttagtgctgacaaccttgctgtgacagatgatgataatgaaatg
aacaatcttcaaatagcagtagcaagaatgcagaagggcatagactatgtgaaaagaaaa
gtgcgcgaattcatccaaaaagctttcgttaaaaaacaaaaagccttagatgaaatcaaa
ccacttgaagatttgaacaacaaaaacagttgtatttccaaccatactgcagaattgagc
aaggaccatgattatattaaagatgtgaatggaacaactagtggcataggcacaggcagc
agtgtggagaaatatataattgatgaaagtgattatatgtcattcataaacaacccaagc
ctgactgtgacagtgcccattgctgtgggtgaatctgactttgaaaatttaaatacagag
gagtttagtagtgaatcagacctggaggagagcaaagagaagctaaatatgtccagctca
tctgaaggcagcacagttgacattggacttcctgcagaagagcaaccagaagctgaacct
gaggaatccatggagccggaggcctgcttcactgaaggctgtgtacggaggttcaagtgc
tgtcaagtaagtgtagaagaagggagaggaaagcagtggtggaatcttagaaaaacatgc
ttcagaattgttgaacacaactggtttgagactttcattgtctttatgattctcctcagc
agtggagccctggcttttgaagatatatatattgaacagcgcaaaactatcaagaccatg
ctggaatatgctgacaaagtcttcacttacatcttcattctggaaatgctgctgaagtgg
gtggcctatggctatcaaacatactttactaatgcctggtgctggctggactttctgatt
gttgatgtctctttggttagcttaacagcaaatgcattgggttactctgaacttggtgcc
attaagtcccttaggacactaagagctttgagacctctaagagccttgtcacgatttgaa
ggcatgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgttctt
ctcgtttgtcttatattctggctaattttcagcatcatgggagtaaatctgtttgctggg
aagttctactactgtgttaacaccacaactgatgaaaggtttgaagtcgaccaaatcaac
aattttagtcagtgcgaggaactcataaaaaacaatcaaagtgcccgatggaaaaacgtg
aaagtaaactttgataatgtaggatttgggtatctttctttgcttcaagtagctacattt
aaaggctggatggatattatgtatgcagctattgactcaagagacgtgttacagcaaccc
aagtatgaagacaacttgtacatgtatttatattttgtcatctttatcatttttgggtct
tttttcaccctgaatctgttcattggtgtcatcattgataacttcaatcagcagaaaaag
aagtttggaggtcaagacatatttatgacagaagagcagaagaaatactacaatgcaatg
aagaagttgggatccaaaaaaccacagaagcctataccaagaccagggaacaagtttcaa
ggcatggtctttgattttgtgacacagcaagtattcgacattagtatcatgattcttatc
tgtcttaacatggtcaccatgatggtagaaactgatgaccagagtaaagaaatggaaaac
attttatactggataaacttggtgttcattgtccttttcactggagaatgtgtcctgaaa
ttaatttcactccgccattattatttcactataggctggaatatttttgattttgtcgtt
gtcattctctcaatagtaggtatgttcttagctgagatgattgagaaatattttgtgtcc
cctactttgttccgagtcatccgacttgccagaataggtcgcatcctgcgtctcattaaa
ggcgcaaagggaatccgcactctgctttttgctctgatgatgtctcttcctgctttgttc
aacattggcctgctgctcttcttggtcatgtttatctatgccatatttggcatgtccaac
tttgcctacgttaagagggaagctggaattgatgacatgttcaactttgaaacatttggc
aacagcatgatctgcctatttcaaattaccacatctgctggctgggatggcttgttagcc
ccaattcttaacagcggggagccggactgtgaccctaacaaagctcacccagggagctct
gttaaaggcgactgtggcaacccctcggttgggatcttcttctttgtcagctacatcatc
atatcctttctggtggtggtgaacatgtacattgctgtcattctggagaattttggtgtt
gcaactgaagaaagtgctgagcccttgagtgaggatgactttgagatgttctatgaagtc
tgggagaagtttgatccagatgcaacgcaattcatggaatttgagaaattgtctgatttt
gcagcagctcttgagcctcctcttcaccttcccaaaccaaacaaggtccagctgattgca
atggatctgcccatggtaagcggtgacagaattcactgccttgacatcttgtttgctttc
acaaagcgtgtgttaggggaaagtggggagatggatgccctcaggatacagatggaagac
cgatttatggcatcaaacccttctaaagcttcctatgaaccaattacaacaacgttaaaa
agaaaacaagaagaagtatctgctgtcattattcaacgtgcttttagacgccacctatta
aaacgaacagtaaaacaagcctcttttatctataacaaaaacaaaactgaagggggggct
ggtctgggcattaaagatgaaatccttttggacaagttaaatgaaaactcatttacagag
aagactgatataactgcatcaacagcagtttgtccaccttcttatgatcgtgtaacaagg
gcagtcaaagaaaagcatgaaaaggaagataaaggtgtacagaaataa
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