Trichinella spiralis: Tsp_01393
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Entry
Tsp_01393 CDS
T01609
Name
(RefSeq) putative double-stranded RNA binding motif protein
KO
K18419
microprocessor complex subunit DGCR8
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_01393
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Tsp_01393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Motif
Other DBs
NCBI-GeneID:
10911424
NCBI-ProteinID:
XP_003377256
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MKNEAAQNRQAAQTVDADLVKKLNIPETYVQTIDDYNKRNVSAEELHEYAKKIFDFETIE
VKRFKSWADHRAYHKKLKREKNELLMSAVITGYEDDFSDVVEHQQQQQHQQQQHQQQVKE
KNSEVEWAASTTGCGQQESSSNFNLSLSSRPKLPPNVKLITVPNYNNNRSLKKQFVLNPQ
GKTSIAVLHEYVQKVLRGLVKYEFSETRNATNPFAAVVKLITPNTNTVKQTGPSNGLGAQ
GAVAGDGAAEATAAAPSEMTDWVTIGVGNGNSKKNAKLEAARQALKVLIPGVDFNLDGQP
DSTGEQDEATKLFDLIAINDSRVPELCSKAGQPMPFIILQECIKRNASLSASKINMNIER
VKHQLHAFTLSVGTQEVRVLCMNKKEGKQKASQAMLERLHPHIKSWGALIRLYGYGAQRQ
MNASRKEKANIVKMQAESKQQQQQQHRSGATGDDWSSADKAKLWQSIEKGMMKVWFKEQA
NGHLKPGHFFWDYQHLPSASTSTAATADARSAAS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgaggcggcccagaacaggcaagccgctcagacggtggatgctgatctggta
aaaaagttgaacatacccgaaacttacgtgcagaccatcgatgattacaacaagcgcaac
gtcagtgcggaagagttgcacgagtatgctaaaaagattttcgactttgaaacaattgaa
gtgaagcgtttcaaaagttgggctgatcatcgagcttatcataaaaagttgaaacgtgaa
aagaatgagttgctcatgtcggctgtaattactggttacgaagatgatttcagtgatgtt
gttgaacatcagcagcagcagcagcatcagcaacaacaacatcaacaacaggtgaaggag
aaaaacagtgaagtagagtgggcggcgtccactaccggatgcggtcagcaggagagcagc
agcaatttcaatttgtcgttgagcagccgaccaaaattaccgccaaatgtgaaattgatc
actgtgccgaattataataataatcgatcgctcaaaaaacaatttgtgctcaatcctcaa
ggaaaaacaagcatcgctgtgcttcacgaatacgtgcaaaaagttttacgaggtctggta
aaatatgaattcagcgagacgagaaatgcgaccaatccgttcgctgcagttgtgaaattg
atcacaccgaacacgaacaccgtcaaacagacaggcccgagcaatggtctgggtgcccag
ggggcggtggccggcgatggcgccgccgaagcgaccgccgccgccccttcggaaatgacc
gactgggtaactattggcgtgggcaatgggaacagcaagaagaacgcgaagttggaagcg
gcacgccaagcgctcaaggtgctcataccgggtgtggatttcaatttggacggtcagccg
gactcgactggcgaacaggacgaagcgacaaaactgttcgacttgatcgccatcaacgat
tccagggttcctgaattgtgcagcaaagctggccagccaatgccattcatcattttgcag
gaatgcataaagaggaatgcaagtttgagtgcgtcgaagatcaacatgaacattgaacgg
gtcaagcatcagttgcacgcgttcacgttgagcgtcggcacgcaagaggtgcgtgtactt
tgtatgaataaaaaggaaggcaagcagaaagcttcgcaggcgatgttagaacgtctgcat
ccgcacatcaaatcttggggcgctttgatacggctgtacggttacggtgcgcagcgtcaa
atgaacgcctcgcgtaaagagaaagccaacattgtgaaaatgcaagcggaaagtaagcag
cagcagcagcagcaacatcgcagcggcgccactggcgacgattggtcctcggcggataag
gccaaactctggcaaagtatcgaaaaaggcatgatgaaagtttggttcaaggaacaagcc
aatggtcatttgaagccgggtcattttttctgggactaccagcatctgccgtcggcatcg
acatccaccgcagcaactgctgatgcgcgcagtgctgccagttag
DBGET
integrated database retrieval system
