Tachysurus vachellii: 132841172
Help
Entry
132841172 CDS
T09596
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132841172
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tvc03310
]
132841172
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132841172
Nuclear receptors [BR:
tvc03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
132841172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132841172
NCBI-ProteinID:
XP_060719400
LinkDB
All DBs
Position
2:20673777..20757403
Genome browser
AA seq
439 aa
AA seq
DB search
MSGKGFPVAHFSYFLPHMIGGLSPPSIPTMSVSGYSTPSPATVETQSTSSEEIVPSPPSP
PPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKSCIINKVTRN
RCQYCRLQKCLEVGMSKESVRNDRNKKKKEEKKVECVESGVLSADTELMIESVRKAHQDT
FPSLCQLGKYTTSNSSERRVSLDVDLWDKFSELSTKCIIKTVEFAKQLPGFTTLSIADQI
TLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLP
LEMDDAETGLLSAICLLCGDRQDLEEADKVDVLQEPLLEALKLYVRKRRPHKPHMFPKML
MKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLESTGSGANARSNPAPSGS
CSPSPTPSSAHSSPSTQSP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaagggctttcctgtggctcacttctcctacttccttcctcacatgattggt
gggctttcgccaccctcgatacccacaatgtctgtgagcgggtacagcacgccctcacca
gccaccgtggagacgcagagcacgagttcggaggaaatcgtccccagtccgccgtctcct
cctccaccaccgagggtctacaaaccctgcttcgtctgccaggacaagtcctctggctac
cactacggcgtcagtgcctgtgaaggatgcaagggctttttccgaaggagcatccagaag
aacatggtgtacacgtgtcaccgggaaaagagctgcatcatcaacaaggtgacgcggaac
cgctgccagtactgccgcctgcagaagtgtctggaagtaggcatgtccaaggagtcggtg
cggaatgacaggaacaagaagaagaaggaggagaagaaggtggagtgtgtggagagcggt
gtgctgagcgctgacacagagctaatgatcgagtctgtgaggaaagctcaccaggacaca
ttcccttcactctgtcagcttggcaaatataccacgagtaacagctcggagagacgcgtc
tcactggacgttgatctgtgggataaattcagcgagctgtccaccaagtgcatcatcaag
acggtggagtttgctaagcaacttcccggcttcaccacgctctccattgctgaccagatc
acactgctcaaagccgcctgcctcgacattctgattctgcgtatctgcacacgctacaca
cctgagcaggacaccatgactttctcagacgggttgacgctgaaccgcacgcagatgcac
aatgccggcttcggaccactcacggacctggtgttcgccttcgccaaccagctgctgccc
ctcgagatggacgacgcagagacgggcctgctcagcgccatctgcctgttgtgtggggat
cgtcaggatctggaagaagccgataaggtggacgtgctgcaggagccactgttggaggca
ctgaagctgtatgtgaggaagaggaggccacacaaaccccacatgttccccaagatgctg
atgaagatcacagacctgcggagcatcagtgccaagggggcagagcgagtgatcacactg
aagatggagatccctggctcaatgcctcctctcatccaggagatgctggagaattcagag
gggttggagagcacagggagtggagctaatgcacggtcaaaccccgctccttcaggcagc
tgcagtccctcacccacgcctagctctgcccatagcagcccatccacgcagtcaccctga
DBGET
integrated database retrieval system
