Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_04485
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Entry
M634_04485 CDS
T02761
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M634_04485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpf03019
]
M634_04485
Messenger RNA biogenesis [BR:
vpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M634_04485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AGQ90140
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All DBs
Position
I:911379..911903
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AA seq
174 aa
AA seq
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MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDEGETPEQAMFRELYEEVGL
TKKDVKIIATSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLECDESRINMQRGKSPE
FDGWRWVSYWYPVRQVVSFKRDVYRRAMKEFASLAMPFRERKAKGKRKKQQRRG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatggcgatggttaccgactgaatgttggtattgtgatatgtaataaccatggt
caggtcttctgggctaaacgatacgggcaacactcatggcaatttccacaaggtgggatt
gacgaaggtgaaacacctgaacaggcgatgttcagggagttgtatgaagaagtcggatta
acgaaaaaagacgttaagatcattgcaacaagtcgtcattggttaagatataaactacca
aagcgattggtgcgttgggactccaagcctgtttgtatcggccaaaaacagaaatggttt
ctgctgcgattggaatgcgatgaatcgcgcatcaatatgcagcgcgggaaatcccctgaa
tttgatggttggcgctgggtgagctattggtatccagttaggcaagttgtttctttcaag
cgtgatgtttatcgtcgagcgatgaaagagtttgcatctttagccatgccttttcgagag
agaaaagcgaaagggaaaagaaaaaagcaacaacgtagaggatag
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