Xiphophorus couchianus (Monterrey platyfish): 114150468
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Entry
114150468 CDS
T05908
Symbol
rara
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114150468 (rara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xco03310
]
114150468 (rara)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114150468 (rara)
Nuclear receptors [BR:
xco03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
114150468 (rara)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114150468
NCBI-ProteinID:
XP_027882671
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Position
9:complement(4190331..4377527)
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AA seq
455 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNHHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQDTFPSLCQLGKYTTSNSSERRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDILQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGSRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgagagcgtggacgttgtgggactgaatcccagcccgaacccttttttaatg
atggattattacaaccagagcagaggatgcttgatcccagagaaggggctggtgcccggg
gcgccccatccttacagcacgtccatcaggaaccatcactggaacggctccaatcactca
atagagacccagagcaccagttcagaagagatagtgccaagcccaccctcgcctcccccg
ccgccccgcgtctacaaaccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggattctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgggagaagaactgcatcatcaacaaagtcacccgcaatcgctgc
cagtactgtcggttacagaagtgcctggaagttgggatgtccaaggagtcggtgaggaac
gaccggaacaagaagaagaaggatgagaagaagcaggaatgcacggagagctacgtgctg
agtcccgacacggagcagatgatcgacagggttcgcaaggcgcaccaggatactttccct
tcgctctgccagctgggcaaatacactacgtctaacagctcagaaaggcgcgtgtctttg
gacatagacctgtgggacaagttcagcgaactgtccaccaagtgcatcataaagacggtg
gagttcgccaagcagctgccgggcttcacgacgctcaccatcgccgaccagatcactctg
ctcaaagccgcctgtctggatattctgatactgcgcatctgtacacgttacacaccagag
caagacaccatgaccttctcagacggcctcacgctaaaccgaacccagatgcacaacgcc
ggcttcggtcccctcactgacctggtgtttgccttcgccaaccagctcctgcctctggag
atggacgacgcagaaacggggcttcttagcgccatctgcctgctgtgtggagatcggcaa
gatttagaagaagcagacaaagtggacatcctgcaggagcccctgctggaggccctgaag
atttacgtacggaagaggaggccccacaaacctcacatgttccccaagatgctgatgaag
attactgatctgaggagcatcagtgctaaaggagcggagcgtgtcatcacactgaagatg
gagatccctggatccatgccgcctctcatccaggagatgctggagaactctgagggcctg
gagagcggcgcggcgggcagcaggcccagcggcgcccccccaggcagctgcagccccagc
ctgtcccccagctcggcccaaagcagtccagccacacagtcaccatag
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