Xiphias gladius (swordfish): 120793890
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Entry
120793890 CDS
T07311
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120793890 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xgl03310
]
120793890 (raraa)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120793890 (raraa)
Nuclear receptors [BR:
xgl03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
120793890 (raraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120793890
NCBI-ProteinID:
XP_039990245
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Position
LG9:14520834..14659355
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AA seq
455 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQDTFPSLCQLGKYTTTNSSERRVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEAEKVDILQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGGRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagcgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgcttgatcccggagaaaggactggtgcccgga
gcgccccatccctacagcacgtccatcaggaaccagcactggaacggctccaatcactca
atagagacccagagtaccagctcagaggagatagtgccaagcccgccctcacctccccca
ccgccccgcgtctacaaaccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagtgcctgcgagggctgcaagggcttctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgggagaagaactgtatcatcaacaaagtcacccgcaaccgctgc
cagtattgccggctgcagaagtgcctggaagtcgggatgtccaaggaatcggtgaggaac
gaccggaacaagaagaaaaaggatgagaagaagcaggagtgcacagagagctatgtgctg
agtcccgacacagagcagatgatcgacagggttcgcaaggcacaccaggatactttcccc
tctctctgccagctgggcaaatacactacgactaacagctcggaacgacgtgtatccttg
gacgtagacctgtgggacaagttcagtgaactctccaccaagtgcatcataaagacagtg
gagtttgctaagcagttgcccggcttcacaacgcttaccattgccgaccagatcactctg
ctcaaagccgcctgtctggacatcctgatactgcggatctgtacacgatacacaccagag
caagacaccatgactttctcagatggactcacgctaaaccgaacccagatgcacaatgcc
ggctttggtcctcttaccgacctggtctttgccttcgccaaccagctcctgcctctggag
atggacgatgcagagacaggactgctcagtgccatctgcttgctgtgcggagatcgccag
gacttggaagaggcagagaaggtggacatcctgcaggagccccttctggaggcgctgaag
atttacgtaaggaagaggaggccccacaaaccgcacatgttcccaaagatgctcatgaag
atcactgatctgagaagcattagtgctaaaggagctgagcgtgtcatcaccctgaagatg
gagatccccggttccatgccccctctcatccaggagatgctggagaactcggaaggtctg
gaaagtggtgccgcaggcggccggcccagtggcgcccccccaggcagctgcagccccagt
ttgtcccccagctctgcccaaagcagtccagccacacaatcaccgtag
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