Xiphophorus hellerii (green swordtail): 116727099
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Entry
116727099 CDS
T07363
Symbol
rara
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116727099 (rara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116727099 (rara)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116727099 (rara)
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
116727099 (rara)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116727099
NCBI-ProteinID:
XP_032430136
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Position
10:23074617..23263006
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AA seq
455 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNHHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQDTFPSLCQLGKYTTSNSSERRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDILQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGSRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgagagcgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattattacaaccagagcagaggatgcttgatcccagagaaggggctggtgcccggg
gcgccccatccttacagcacgtccatcaggaaccatcactggaacggctccaatcactca
atagagacccagagcaccagttcagaagagatagtgccaagcccaccctcacctcccccg
ccaccccgcgtctacaaaccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggattctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgggagaagaactgcatcatcaacaaagtcacccgcaatcgctgc
cagtactgtcggttacagaagtgcctggaagttgggatgtccaaggagtcggtgaggaac
gaccggaacaagaagaagaaggatgagaagaagcaggaatgcacggagagctatgtgctg
agtcccgacacagagcagatgattgacagggttcgcaaggcgcaccaggatactttccct
tcgctctgccagctgggcaaatacactacgtctaacagctcagaaaggcgcgtgtctttg
gacatagacctgtgggacaagttcagcgaactgtctaccaagtgcatcataaagacggtg
gagttcgccaagcagctgccgggcttcacgacgctcaccatcgccgaccagatcactctg
ctcaaagccgcctgtctggatattctgatactgcgcatctgtacacgttacacaccagag
caagacaccatgaccttctcagacggcctcacgctaaaccgaacccagatgcacaacgcc
ggcttcggtcccctcactgacctggtgtttgccttcgccaaccagctcctgcctctggag
atggacgacgcagaaacggggcttcttagcgccatctgcctgctgtgtggagatcggcaa
gatttagaagaagcagacaaagtggacatcctgcaggagcccctgctggaggccctgaag
atttacgtacggaagaggaggccccacaaacctcacatgttccccaagatgctgatgaag
attactgatctgaggagcatcagtgctaaaggagcggagcgtgtcatcacactgaagatg
gagatccctggatccatgccgcctctcatccaggagatgctggagaactctgagggcctg
gagagcggcgcggcgggcagcaggcccagcggcgcccccccaggcagctgcagtcccagc
ctgtcccccagctcggcccaaagcagtccagccacacagtcaccatag
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