Xiphophorus maculatus (southern platyfish): 102222808
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Entry
102222808 CDS
T02923
Symbol
rara
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102222808 (rara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xma03310
]
102222808 (rara)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102222808 (rara)
Nuclear receptors [BR:
xma03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
102222808 (rara)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102222808
NCBI-ProteinID:
XP_023196564
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Position
10:22685140..22874524
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AA seq
455 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNHHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQDTFPSLCQLGKYTTSNSSERRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDILQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGSRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgagagcgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattattacaaccagagcagaggatgcttgatcccagagaaggggctggtgcccggg
gcgccccatccttacagcacgtccatcaggaaccatcactggaacggctccaatcactca
atagagacccagagcaccagttcagaagagatagtgccaagcccaccctcgcctcccccg
ccgccccgcgtctacaaaccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggattctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgggagaagaactgcatcatcaacaaagtcacccgcaatcgctgc
cagtactgtcggttacagaagtgcctggaagttgggatgtccaaggagtcggtgaggaac
gaccggaacaagaagaagaaggatgagaagaagcaggaatgcacggagagctacgtgctg
agtcccgacacggagcagatgatcgacagggttcgcaaggcgcaccaggatactttccct
tcgctctgccagctgggcaaatacactacgtctaacagctcagaaaggcgcgtgtctttg
gacatagacctgtgggacaagttcagcgaactgtccaccaagtgcatcataaagacggtg
gagtttgccaagcagctgccgggcttcacgacgctcaccatcgccgaccagatcactctg
ctcaaagccgcctgtctggatattctgatactgcgcatctgtacacgttacacaccagag
caagacaccatgaccttctcagacggcctcacgctaaaccgaacccagatgcacaacgcc
ggcttcggtcccctcactgacctggtgtttgccttcgccaaccagctcctgcctctggag
atggacgacgcagaaacggggcttcttagcgccatctgcctgctgtgtggagatcggcaa
gatttagaagaagcagacaaagtggacatcctgcaggagcccctgctggaggccctgaag
atttacgtacggaagaggaggccccacaaacctcacatgttccccaagatgctgatgaag
attactgatctgaggagcatcagtgctaaaggagcggagcgtgtcatcacactgaagatg
gagatccctggatccatgccgcctctcatccaggagatgctggagaactctgagggcctg
gagagcggcgcggcgggcagcaggcccagcggcgcccccccaggcagctgcagccccagc
ctgtcccccagctcggcccaaagcagtccagccacacagtcaccatag
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