Xanthomonas oryzae pv. oryzicola BLS256: XOC_1136
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Entry
XOC_1136 CDS
T01873
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xor03032
]
XOC_1136
03036 Chromosome and associated proteins [BR:
xor03036
]
XOC_1136
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_1136
DNA replication proteins [BR:
xor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XOC_1136
Chromosome and associated proteins [BR:
xor03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XOC_1136
DNA repair and recombination proteins [BR:
xor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XOC_1136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AEQ95330
UniProt:
G7TFX4
LinkDB
All DBs
Position
1115508..1115780
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AA seq
90 aa
AA seq
DB search
MNKTELIDGVAAAADISKAEAGRAVDAVVSEITKALKKGDAVTLVGFGTFQVRERAERTG
RNPKTGDSIKIAASKNPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccgaattgatcgatggcgttgccgctgccgctgacatctccaaggctgaa
gctggccgtgctgttgacgcggttgtgagcgaaatcaccaaggcactgaaaaagggcgac
gccgtcaccctcgttggcttcggtaccttccaggttcgcgagcgcgctgagcgcaccggc
cgcaatccgaagaccggcgacagcatcaagatcgcggcgtcgaagaatcctgcattcaag
gctggtaaagccctgaaggatgcagtaaactaa
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