Acinetobacter pittii: BDGL_002301
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Entry
BDGL_002301 CDS
T01684
Name
(RefSeq) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acc
Acinetobacter pittii
Brite
KEGG Orthology (KO) [BR:
acc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acc03016
]
BDGL_002301
Enzymes [BR:
acc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BDGL_002301
Transfer RNA biogenesis [BR:
acc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BDGL_002301
Prokaryotic type
tRNA splicing ligases
BDGL_002301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-GeneID:
11636832
NCBI-ProteinID:
YP_004996569
UniProt:
F0KNA2
LinkDB
All DBs
Position
2494481..2495686
Genome browser
AA seq
401 aa
AA seq
DB search
MGIQKILNKEALYGVPVKIFTQDIDSESIEQLKRMAQLQFIYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFALHKQVK
AKASSIIPLEKRLEPIIKKHPGLVRMLRQFDATWQKQLGTLGGGNHFIELCIDENQDVWV
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSKSFDDYVEGVEWAQEY
AFENRKEMMRLILEAIRPLLPSFQTTKEAINCHHNYVSRETHFGENLLITRKGAIRAGLD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKVLFNQQDLIEQTQGIECR
KDNGVVDEIPSAYKDIDEVMANQSDLIEVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaatattaaacaaggaggcactctatggtgtccctgttaaaattttc
actcaagacatagatagtgaaagcatcgaacaactcaaaagaatggctcagctgcaattc
atctattctcatattgcagttatgcctgatgtgcatgtgggcaaaggtgccactgtaggt
agtgttattcctactaaacacgccattattcctgctgctgtaggagttgacattggatgt
ggaatgaatgcaattcgcttgagtttaaaggcttcacaattacctgataacttaagtcgt
ttgcgtgatgcgatcgaacgtaaagtaccggttggctttgctttgcataaacaagtcaaa
gcgaaagcttctagcattattccacttgaaaaacgcttagaaccaattatcaaaaagcat
cctggacttgttcgaatgcttcggcaatttgatgcaacatggcaaaaacaacttgggacc
ttgggtggtggtaatcactttatagagttatgtattgatgagaatcaagatgtatgggta
atgctacactcaggtagcagagggctcggtaatgttattggtacttattttattgaactt
gccaagaaagaagctcagcatcgctttggccatgtaccagataaagacttaagttatttt
gctgaaggctcaaaaagttttgatgattatgtagaaggtgtagagtgggcacaagaatat
gcttttgaaaatcgcaaagagatgatgcgattaattttagaagcgatccgccctcttcta
ccttcttttcaaacgacaaaagaagcgattaattgtcatcataattatgtaagccgtgaa
acacattttggcgaaaatctattgattacccgaaaaggtgcaattagagcaggcttagat
gagctaggtattattccaggttcaatgggagcacgatcttatattgttaaaggcaaagca
aatcctgaatcattttgctcttgttctcatggcgctggtcgcaaaatgagcagaagtaaa
gcaaaagttctttttaatcagcaagatcttattgaacaaacccaaggaattgaatgtcgt
aaagacaatggcgttgtcgatgaaattccaagcgcctataaagacattgatgaagtcatg
gcgaatcagtcagatctcattgaagtcgttcatactctaaaacaagttttatgtattaaa
ggttaa
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