Acinetobacter oleivorans: AOLE_17430
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Entry
AOLE_17430 CDS
T01263
Name
(GenBank) Ribonuclease E(RNase E)
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
acd
Acinetobacter oleivorans
Pathway
acd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOLE_17430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acd03019
]
AOLE_17430
03009 Ribosome biogenesis [BR:
acd03009
]
AOLE_17430
Enzymes [BR:
acd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AOLE_17430
Messenger RNA biogenesis [BR:
acd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AOLE_17430
Ribosome biogenesis [BR:
acd03009
]
Prokaryotic type
rRNA processing factors
AOLE_17430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ADI92371
UniProt:
D8JH39
LinkDB
All DBs
Position
3709811..3713161
Genome browser
AA seq
1116 aa
AA seq
DB search
MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYFQADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEILASLNLPRGMSVIVRTAGIGRTQEELQL
DLQHLLDLWAQIQGTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKERNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSGVRVTVLPHPHLETPHY
EIQYNPDGFAPSSYERTEATRSSEKELGYESSEWHLEEADHGHAHAAPAANNAAGQKKAN
QAAQPSAAQPSTQKAASPLAWLENLFVQKQAKTIDQSRSAQNAAATIEQMVNTGAVSRGQ
FGQVAVPPVAETVAAPSNNAYISQSPAKQEVRENVEKDDKVQQRPNNKKRKHKEQREQHH
HAQEPQQQQQPQQVHEEVVQLSRQEQRELKRQQKRQHPDQSHQQHQNDGQQTENAVPRRD
RNNQQRPNRPNRHRDPSVLNENQNAPAAPVVVDEKQIKVDLIDAPKHEVMNTALVINVDQ
AQSEIIALTPEQPVERTETAPVVEVAQEPAPAPVAVVEEAVPAKAEETTTPPADSKAQPQ
IQRASNDPRMRRREQRNAKRAKAAVPSIAPSQIPTLAQYTIGSLIRHVYGEDCTVLIEQF
GLVPTFNRALQKFAEQYASTLATEVVSDAEDKKPVTRDAELPSNKPSQEAEPAPVLALTP
QKEQTPRVANDPRERRRLAKLAAEQAFEQVKQQHAAPEEAAPVAPAVEETVVAPAAETQA
PVESKQQPLELDQVTEVAQSETSTEETPATTVVEAPVVKQPKASARAKAAVEQAVAPTEA
TAEVESDDSKADQDKPSRPPRRPRGRPPKKANPVAE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaactcacgcagaagaagtccgcgttgcacttatcact
ggtaatcgtctttacgattttgatttagaaaatcgtacccgagaacagaaaaaatccaat
atctataaaggccatgtaacccgcgtagaaccttctttagaagctgtgtttgttgaatat
ggcgcaggccgtcaaggcttcttgtctatgcgcgaaattgcgaatagttatttccaagca
gacccgcgacaaacttcaaacattcgtgaactcatcactgaaggtactgaattacttgtt
caggttgaaaaagaagaacgtggtaacaaaggcgctgccctttctacattcatctcactt
gcaggacgttatttggttcttatgccaaacaacccgaaaggcggtggtattagccgtcaa
atttcaggttctgtacgtgaagaattaaaagaaattttagcttctttaaatttacctcgc
ggcatgagtgttattgtgcgtaccgcaggtattggccgtactcaagaagaattacagtta
gatttacagcatttgcttgacctttgggcacaaatccaaggcactgcaagttctggtccg
tctccaatgcttgttcatcaagaagctggcgtagttactcgtgccatccgcgactactta
cgtgatgacgttgcagaaattttaattgatagcgaacaagcttataacgaagcgtataac
tttgttaaagcagttatgccacgtcaattagacaaacttaaaacttatactttaaacgag
ccattgtttgctcattttggtattgaaagccaaattcaaactgcttacgagcgtgaagta
aaacttccttctggtggttcaatcgtaattgaccagactgaagctttagtttcaatcgac
attaactctgcgaaatcgactcgtggacatgacgttgaagaaactgcgcttaatacaaac
ctagaggcagcagaagaaattgctcgccaacttcgtcttcgtgacattggcggtttagtt
gttatcgacttcatcgatatgactaaagaacgcaaccaacgcatggttgaagcaaaactt
cgtgaagcaacacaaagcgaccgtgcgcgtatccagtttggccaactctctcgttttggc
ttaatggaaatgagccgtcaacgcttacgcccatcacttgaagaagcaactggatatgtt
tgcccacgctgtcatggcacgggtatggtgcgtgacttacgttcactttcgctttcaatt
atgcgtaaagtagaagaaattgcacttcgtgaacgtcatggtgaagtacaagtagaagtt
cctgttgaaattgcagcattcttactcaacgaaaaacgccatagccttgtttatttagaa
caaacttctggtgttcgtgtgactgttttacctcacccgcacttagaaacacctcactat
gaaattcagtacaatccagatggatttgcaccatctagctatgagcgtacagaagcaact
cgttcaagtgagaaagagttaggttatgaatcttctgaatggcatttagaagaagctgat
catggccatgctcatgcagctcctgctgcaaataacgcagctggtcaaaagaaagcaaat
caagcagctcaaccttctgctgctcagccaagcactcaaaaagcagcaagccctctcgca
tggttagagaacctttttgttcaaaaacaagctaaaactattgatcaatctcgttcagca
caaaatgctgctgcgacaattgaacaaatggtcaatactggcgctgtaagccgtggccag
tttggacaagttgcagtaccgccagttgctgaaactgttgcggctccatctaataatgct
tacatttcacagtctcctgctaaacaggaagttcgtgaaaatgttgaaaaagacgataaa
gtacaacaacgtccaaacaacaaaaaacgtaagcacaaagagcaacgtgaacaacatcac
catgctcaagagccacaacaacagcaacaaccacaacaggttcacgaagaagttgtacag
ttatcacgtcaagaacaacgtgagttaaaacgtcaacaaaaacgtcagcacccagatcag
tcacatcaacaacatcaaaatgatggacaacaaactgaaaatgccgtgccgcgtcgtgac
cgtaataatcaacaacgtccgaaccgtccaaatcgccaccgcgatccaagtgtattgaat
gaaaatcaaaatgcaccggcggcaccagtagttgttgatgagaaacaaattaaggttgat
ttgattgatgctccaaagcatgaagtcatgaatacagccttagtaatcaatgttgatcaa
gcacaaagcgaaattattgctttgactccagagcaacctgttgaacgcactgaaacagca
cctgttgttgaagtcgctcaagagccagctccagcacctgttgcagttgtagaagaagca
gtccctgccaaagcagaagaaacgacgactcctcctgcagacagcaaagctcaaccgcaa
attcaacgtgcgagcaatgaccctcgtatgcgtcgtcgtgaacaacgcaacgcgaaacgt
gctaaagctgcggtaccatcaattgccccatcgcaaattccaacgttggcgcaatatacg
attggtagcttgattcgtcatgtttatggtgaagactgcacagtattgattgaacagttt
ggtttagttccaacattcaatcgtgcattgcagaagtttgctgaacagtacgctagtacg
ctagcaacagaagtcgtgtctgatgctgaagacaaaaagcctgttactcgtgatgcagag
cttccaagcaacaagccatcacaagaagcagagcctgcgcctgtacttgcattgacgcca
caaaaagagcaaacaccacgtgttgctaatgatccacgtgagcgtcgtcgtttagcaaaa
cttgctgcggaacaagcttttgagcaagttaaacaacaacacgctgcaccagaagaagct
gcacctgtagctccagctgttgaagaaacggttgttgctcctgctgctgaaacacaagca
cctgttgagtcaaaacaacaaccgcttgagcttgatcaggtgactgaagtagcacaaagt
gaaacaagcacagaagaaacaccagcgacaacagtagttgaagctccagttgttaaacag
cctaaagcatctgcaagagcaaaagctgccgtagaacaggctgtagcaccaacagaagct
actgcagaagttgaatcagacgattctaaggcagatcaggacaaaccaagtcgtcctcct
cgtcgccctcgtggtcgtccaccaaagaaagcaaatcctgtagctgagtaa
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