Anoplopoma fimbria (sablefish): 129092664
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Entry
129092664 CDS
T09102
Name
(RefSeq) PDZ domain-containing protein 7-like
KO
K21882
PDZ domain-containing protein 7
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129092664
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129092664
Cilium and associated proteins [BR:
afb03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129092664
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
129092664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129092664
NCBI-ProteinID:
XP_054456654
LinkDB
All DBs
Position
6:complement(13091240..13105236)
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AA seq
977 aa
AA seq
DB search
MDRSFHPSGRSEMTNGGGHPQFNHGGQAGGSHSTTRYMLKKQHRHRHRSSSPMGRVILIN
TPVDGGDDCEDIHTVTVDKSPDGRLGFSVRGGSEHGLGIFVSKVEDDSSAAQAGLTVGDK
LVEVNGVSLESITMSSAVKVLTGNNRLRMVVRRVGKIPGIRFSKEKTTWVDLIHRRMVVE
ESGRTPSEASSDSALRRIVHLFTTSDDYCLGFNIRGGKEFGLGIYVSKLDPGGLAERHGI
KMGDQILAANGISFDDITHSNAVEVLKSHTHVMLTIREAGRYPAYKEMVAEYGWLDKLGN
GGLAPSSQGSDSNSSASSMSSTPLSSLSGLSQVLFPPLFGTEMVDVAISTEDRSRRQSRA
ERTADSSMQTDPQPPNQPDQPLTNGSYPDRLVATETSRTVGATVLLKDTVVRGKGEGPRE
KGGPGEGGRGRTRTLSSGDREVEKHSPKTAALMALSRPRKPIRRSQSHITVSEDKQKKKR
QQKEKSSGEGKTSLQRSKTFVNLFFKKERKDKSRSKSPSHHADKDKERGRPFQLLTSPRE
SRAGVKDSSLLPRPETLQHVEDMARKLLSQDEVAAVMRHCRRFLSDIVIEELVRPLLAIL
DRPEKLLLLREIRMLIPTTELGQFDSMVMPFELEAYEILKSRSVRSPALRSPRSGTPRRH
LITPIPDYRGGFHLQPVQDKLRECQLVEEFERLRLSSQQSGHLPPSRTFTPLLDVPVDNY
VSSNGRSRSLSPSPTHSFLLRESPHSSQHVRQTHRSTNRRENGTSQYDEVSLLSVSDRGD
AAPERGRSPVRNGHGRAMREWSPDSVDGIRCRQEGYTEVSVRVPPQRRGRTPLDDVFEAQ
RDKSPSTGRESSQQLNGHSQNGVKRRASEEYEFKTLTISKAKQSLGISISGGMESRVQPM
IKIEKIFPGGAASMNETLKAGYELLSVDGESLQGVTHQHAVDVIRRAFSNKAKDPMVFVV
KVSKVPTTPTSPRRPAD
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctcctttcacccctctggccggagtgagatgacaaatggaggggggcacccc
cagttcaaccacggaggccaggccggggggtcccacagcaccacacgctacatgctgaag
aaacagcaccgccacagacacaggtcctcctcaccgatgggcagggtcatcctcatcaac
acacctgttgatggaggtgatgactgtgaagacattcacacagtgacagtcgacaagagt
ccagatgggcgtctgggtttcagtgtccgcgggggctctgaacatggactcggtatattt
gtcagcaaggtggaagacgacagctctgcagcgcaggccgggctgactgtgggcgataag
ctggtggaggtgaatggggtcagcctggagagcatcaccatgagcagtgctgtgaaggtt
ctgacgggcaacaacaggctgcggatggtggtgagacgcgtgggcaagatccccggcatc
cgcttctccaaggagaagaccacatgggtggatttgattcaccggcggatggtggtggag
gagagcggtcgaacaccgtcagaggccagttcagacagcgctctccgcaggatcgtacat
ctcttcaccacgtcagacgactactgtttgggcttcaacattagaggaggcaaagagttc
ggactgggaatttatgtttctaagttggacccgggcgggctcgcagaacggcatggcatc
aagatgggcgatcaaatcctcgcagccaacgggatcagctttgatgacatcacccacagt
aatgcagtcgaggtcctgaagagccacactcatgtcatgttgaccatcagggaagctggc
agataccctgcatacaaggagatggtggcagaatatggctggctcgacaaattgggcaat
gggggcctcgcaccatcctcccagggttcagactccaactcctctgcctcctcgatgtcc
agcaccccactcagctccctcagtggtctctcccaggttcttttccctcctctctttggc
accgagatggtagacgtcgccatctccacagaggatcgctcccgacgccaaagcagagca
gagcgaactgctgacagctccatgcagaccgacccccaacccccaaatcagccagaccaa
cccttgactaatgggtcgtaccccgacaggctggtcgccacagaaactagccggactgta
ggtgccacagtgctgctgaaggacacagtcgtacgagggaaaggggaaggcccgagggaa
aagggaggacctggagaaggagggcgaggacgtacaaggacgctgtcatctggggaccga
gaagtagagaaacactcacctaagacagcagcgctgatggccctgagcagaccacggaag
ccaatcagacgttcccagagccacatcactgtgtcagaggacaaacagaaaaagaagaga
caacagaaggagaagagctctggagagggtaaaaccagcctgcagcgatctaaaaccttt
gtcaacctgttcttcaagaaagagcgtaaagataaaagccgctccaagtcaccatctcac
catgccgacaaagataaggagcggggtcgtcccttccagctcttgacctcccctagggaa
tcccgtgctggggttaaagacagcagcctgctgccccgaccagagaccctgcagcacgtg
gaggacatggcaaggaagctgctcagccaggatgaggtggctgctgtgatgagacactgt
cggcggtttttgtccgacattgtaatcgaggaattagtgcgcccccttttggcaatcttg
gacaggccggagaaactgttacttctcagagaaataaggatgctgatacctactactgag
ctgggtcagtttgacagcatggtcatgccctttgagctggaggcgtacgaaatcctcaag
agtcgctctgttcgttctccagctctgcggtcgcctcgcagtggaacccctcgacgtcac
ctcatcaccccaatcccagactacaggggtgggttccacctccagccggtccaggacaaa
ctgcgggagtgtcagctggttgaggagttcgagagattacgtttgtccagccaacagtca
ggccatctgcctccatctcgtaccttcacccctcttctggatgtaccagtggacaactat
gtctcttccaatgggcgctcccgttccctgagcccctcacccacccacagcttcctcctc
agggaatcacctcacagctctcaacatgtgcgccaaacccatcgctccacaaacagaagg
gaaaacgggacatcgcagtatgatgaggtctccttgttgtcagtgtccgaccgaggagat
gcagctcctgaacgggggaggtcgcctgtgaggaacggtcatgggagagcgatgagggag
tggagtcctgacagcgtagatggcatacggtgcaggcaggagggctacacagaggtcagc
gtacgcgtgcctccacagcgtcgaggaagaacccctctggatgatgtgtttgaggcccag
agagacaagagtccatccacaggcagagagagcagtcagcagctaaatggacattcacaa
aatggtgtgaaaagaagagcatctgaggagtatgaattcaaaactttgaccatctctaag
gccaagcagtcactgggtattagtatctctggaggtatggagtctagagtccagcccatg
ataaagattgagaaaatctttccaggaggagctgcatctatgaatgagactctcaaggca
gggtatgagctgttgtctgtggacggcgagagtctgcagggagtgactcatcagcacgcg
gtggacgtgattcgcagagcgttcagcaacaaggccaaagaccccatggtttttgtggtc
aaggtctccaaggtccctaccacccccacaagccccaggagaccagcagactaa
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