Altererythrobacter sp. BO-6: G6N82_00480
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Entry
G6N82_00480 CDS
T06465
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
alh
Altererythrobacter sp. BO-6
Pathway
alh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G6N82_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alh03019
]
G6N82_00480
03009 Ribosome biogenesis [BR:
alh03009
]
G6N82_00480
Enzymes [BR:
alh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
G6N82_00480
Messenger RNA biogenesis [BR:
alh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G6N82_00480
Ribosome biogenesis [BR:
alh03009
]
Prokaryotic type
rRNA processing factors
G6N82_00480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QIG52837
UniProt:
A0A6G6X5W6
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Position
complement(102085..104763)
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AA seq
892 aa
AA seq
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MATRMLIDARHPEETRVAVVKGNRIEEFDFESAEHKQIKGNIYLAKVTRVEPSLQAAFVD
FGGNRHGFLAFSEIHPDYYQIPQADREALLAEEAEAAEEEARLRDEEEDRGELPGDEYDA
EDEESAEALVEEIAEDGVEEIDTSEKDKVSTIEDGHVDGNGDDDEDDDEDSDDEEASEDD
GESGRKSGRDRGRRGRRRQGGGKNRAKEVDEVRARRQALRRRYKIQDVIQRRQVLLVQVV
KEERGNKGAALTTYLSLAGRYTVLMPNSSHGGGISRKISSASDRKRLKEIVSDLKLPKTM
GLIVRTAGLSRTKPEIKRDFDYLARLWDEIREKTLKSTAPTLIHSDSDLIKRAIRDIYNK
EIEEVVVEGEDGYKSAREFMKLLMPSHARRVKAYSDPVPLFQRFGAEDQLRAMYDPVVQL
KSGGYLVINPTEALVSIDINSGRSTKEHGIEQTALATNLEAAREIARQLRLRDMAGLVVI
DFIDMEYSSNIRKVEKAMKDALRNDRARIQVGRISGFGLMEMSRQRLRTGVLEATTRACP
HCDGTGLVRTASSAGLSALRLIEDEAAKGKGTIIRLGASTEAAIYLLNAKRDDLVEIEQR
YGVRVEVVPEGEEEGAKMSVASAGPRPSHAPKFEPIVDDDDEDDIPEDIDDEDEDEGPRQ
SRRDRNDDDDEDERKKKRRRRRRGGRGRNKNRRDDEDEDERDEEEGEESSGSDDRASGED
ENGERPKKRRRRGGRGRNKKRREQAGDGEQGEMLDDIAEQVSEDISVIGTPEDAPQADEK
PKRKRAPRKKKAEGETEAEAEAVTAPEAEAAAPKPKRAPRKKKVEVEAEAEAAPAEPEAE
APKKPARKRATRKAKADSEATETVTTEAEPAKAEETSGSPKRGWWQRTFGEE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcgcatgctcatcgacgcgcgccacccggaagaaacgcgggtggcggtggtc
aaaggcaaccggatcgaagaatttgattttgaatctgccgaacacaagcagatcaagggc
aatatctacctcgccaaggtaacccgggtagaaccatcgctgcaggcggctttcgtcgac
ttcggcggcaaccgccacggcttcctcgcctttagcgaaatccatcccgattattaccag
atcccgcaggcggatcgcgaagcgctgctggccgaagaggctgaagccgccgaggaagaa
gcgcgcctgcgtgacgaagaggaagatcgcggcgaacttcccggcgacgaatatgatgcc
gaagacgaggagtccgccgaggctctcgtcgaggagatcgccgaagacggggtcgaggaa
atcgacacctccgagaaagacaaggtctcaacgatcgaagacggccatgttgatggcaat
ggcgacgatgacgaagacgacgatgaggactcggatgacgaagaagcatccgaggacgat
ggcgaatccggccgcaagtcgggtcgcgaccgtggccggcgcggccgtcgccgccagggt
ggcggcaagaatcgcgccaaggaagtcgacgaagtgcgtgcccgccgccaggcgctgcgc
cgccgctacaagatccaggacgttatccagcgccgccaggtgctgctggtgcaggtcgta
aaggaagagcgcggcaacaagggcgcggcgctgaccacctatctcagccttgccggccgc
tacaccgtgttgatgcccaattcgtcgcatggtgggggcatcagccgcaagatcagttct
gccagcgatcgcaagcggctcaaggaaatcgtctctgacctcaagctgcccaagaccatg
gggcttatcgttcgcacggccgggctcagccggaccaagccggaaatcaagcgtgacttc
gattaccttgcccggctgtgggacgaaatccgcgaaaagacgctgaaatcgaccgcgccc
accctgatccattcggattcggacctgatcaaacgcgccatccgcgacatctacaacaag
gaaatcgaggaagtcgtcgtagagggcgaggatggctacaagtctgccagggagttcatg
aagctcctgatgccgagccacgcgcggcgggtaaaagcctattccgacccggtcccgttg
ttccagcgctttggcgccgaagaccagctgcgggcgatgtatgaccctgtcgttcagctc
aaatcgggcggatatcttgtaatcaacccgaccgaagcgctggtttcgatcgacatcaac
tccggccgctccaccaaggagcacgggatcgagcaaaccgcgctcgccaccaacctggaa
gctgcgcgggaaatcgcccgccagctgcgcctgcgcgacatggccggactggtcgtaatc
gacttcatcgacatggagtacagctccaacatccgcaaagtcgaaaaggcgatgaaggat
gcgctcaggaatgaccgggcgcgcatccaggtcgggcggatttcgggcttcggcctgatg
gagatgagccgccagcggctgcgcaccggcgtgctcgaggcaaccacgcgcgcatgcccc
cattgcgacggaacgggcctggtacgcacggcttcgagcgcgggcctgtccgcactacgc
ttgatcgaggacgaagcggccaagggcaagggtacgatcatccgccttggcgccagcacc
gaagcggcgatctacctgctcaacgccaagcgcgacgacctggtcgagatcgaacagcgc
tatggcgtgcgcgtcgaagtggtgccggaaggcgaggaagaaggcgccaagatgagcgtt
gccagcgccggcccgcgcccctcgcatgcgccaaagttcgaaccgatcgtcgatgacgac
gacgaagacgacatccccgaggatatcgacgacgaggatgaggacgaaggcccccgccag
tcacgccgcgaccgcaatgacgacgatgacgaagatgagcgcaagaagaagcgccgccgg
cgccgccgtggcggccgcggccgcaacaagaatcgccgtgacgacgaggacgaggatgag
cgcgacgaggaagaaggcgaagaatcgtccggctccgacgatcgcgcatccggcgaagac
gagaacggcgagcgacccaagaagcgccgtcggcgcggtggacgcggccgcaacaagaag
cgccgcgaacaggcgggtgatggtgaacagggcgaaatgctcgatgatatcgccgagcag
gtctccgaagacatttcggtaatcggtacacccgaggacgctccgcaagcggacgaaaag
cccaagcgcaagcgcgcgccgcgcaagaagaaggctgaaggcgaaacggaagcagaggct
gaagctgtgaccgcgccggaagccgaagcggctgcgcccaagccgaagcgcgctccccgc
aagaagaaagtcgaggttgaagctgaagctgaagcagctccggctgaacccgaagcggaa
gctccgaaaaagcctgcacgcaagcgcgcaacccgcaaggccaaggcggattccgaggca
accgaaaccgttacgaccgaggctgagccggcaaaggctgaggaaaccagtggttcgccc
aagcgcggttggtggcagcggaccttcggcgaagagtga
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