Anas platyrhynchos (mallard): 101802613
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Entry
101802613 CDS
T02816
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101802613 (PTCH1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
101802613
NCBI-ProteinID:
XP_038026416
Ensembl:
ENSAPLG00000012739
EnsemblRapid:
ENSAPLG00030016726
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All DBs
Position
Z:complement(44538374..44609891)
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AA seq
1441 aa
AA seq
DB search
MASAANASEPETSSSAGGGGHPGRAARSGGRRRRSGGSRRAAAPDREYLQRPSYCDAAFA
LEQIAKGRATGRKAPLWLRAKFQRLLFRLGCYIQRNCGKFLVVGLLIFGAFAVGLRAANL
ETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPQEDGANVLTTEALRQHLDS
ALQASRVHVYMYNRQWKLEHLCYKSGELITEAGYMDQIIEYLYPCLIITPLDCFWEGAKL
QSGTAYLLGKPPLQWINFDPLEFLEELKKINYQVESWEEMLNKAEVGHGYMDRPCLNPAD
PDCPITAPNKNSTKPLDVALVLSGGCYGLSRKYMHWQEELIIGGTVKNSSGKLVSAQALQ
TMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRMYVEVVHQSVAQNSTQKVLS
FTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVALSV
AAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECL
KRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLY
RREDRRLDIFCCFTSPCVTRVIQIEPQAYAENDNTCYSPPPPYSSHSFAHETQITMQSTV
QLRTEYDPHTQVYYTTAEPRSEISVQPVTVTQDNLSCQSPESTSSTRDLLSQFSDSSMHC
LEPPCTKWTLSTFAEKHYAPFLLKPKAKIVVIFLFLGLLGLSLYGTTRVRDGLDLTDIVP
RETREYDFIAAQFKYFSFYNMYIVTQKADYPNVQHLLYELHKSFSNVTYVLLEEDRQLPK
MWLHYFRDWLQGLQDAFDSDWETGKITYNNYKNGSDDAVLAYKLLVQTGNRAKPIDISQL
TKQRLVDADGIINPNAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLR
IPAAEPIEYAQFPFYLNGLRETSDFVEAIEKVRAICSNYTSLGIASYPNGYPFLFWEQYI
GLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSAVP
VVILIASVGIGVEFTVHVALAFLTAIGDKNHRAVLALEHMFAPVLDGAVSTLLGVLMLAG
SEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGRNRLPTPSPEPPP
SVVRFALPPGHTNNGSDSSDSEYSSQTTVSGISEELHHYEATQGPGAPVHQVVVEATENP
VFARSTVVQPETRHQSSPRLQSNPEAGTQQAWRQGRQPKREVREGLRPPPYRPRRDAFEI
STEGHSGPSNRDRLGHRARSHNMRSPAFGAMGTSGPAYCQPITTVTASASVTVAVHPAVH
SHSSRGGSFPSYEGYHEADHGMFEDPHVPFNVRCERRNSKVEVIELQDVECEERTAGKSS
V
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggccgctaacgcctcggagccggagaccagcagcagcgcgggcggcggcggc
caccccggccgggcggcgaggagcggcggcaggcggcggaggagcggaggcagccggcgc
gccgcggcgcccgaccgggagtatctgcagcggccgagctactgcgatgcggcgttcgcc
ctggagcagatcgcaaaggggagagcgaccgggaggaaggcgccgctgtggctgcgagcc
aagtttcagagactgctctttagactgggctgctacattcagaggaactgcggcaagttc
ctggtggtcggcctcctcattttcggggccttcgctgtcggattacgggccgccaacctc
gagaccaacgtggaggagctgtgggtggaagttggtggacgagtgagccgggagctaaat
tacacacggcagaagattggagaagaggccatgtttaacccccagctcatgattcagact
ccacaggaagatggtgctaatgtactaacaacagaagcactccgacagcaccttgactct
gcacttcaggccagcagagtacatgtctatatgtacaacagacaatggaaattggaacat
ttatgttacaaatcaggagaactcatcacagaagcaggttacatggaccagatcatagaa
tatctttatccttgcttaattatcactcctttggactgcttctgggagggagcaaagcta
cagtcaggaactgcctatctattaggaaagcctcctttgcagtggatcaactttgacccc
ttagaattcttggaagagttaaagaaaataaactaccaagtggagagctgggaagaaatg
ctgaataaagcagaggttggtcatggttatatggatcgaccttgcctgaatcctgctgat
cctgattgcccaatcacagctcccaataaaaattccaccaaacctcttgatgtagccctt
gttttgagtggtggatgctatggactgtcaagaaaatacatgcattggcaggaagagttg
attattggtggaacagtcaagaacagttctggtaaacttgtcagtgcccaggctttgcaa
accatgtttcagttaatgactcctaagcaaatgtatgaacacttcaaggggtatgaatat
gtttcacatatcaactggaatgaggataaggcagcagcaattctggaagcctggcagagg
atgtatgttgaggttgttcatcaaagtgttgcacaaaactctactcagaaggtgctttcc
tttactacaaccaccctggatgacatcctgaagtcattttctgatgtcagcgtcatcaga
gtagctagtggctacttactaatgcttgcctacgcctgtttaacaatgttgcggtgggat
tgtgccaagtctcagggtgctgtggggctggcaggagtcttgctggttgctctctcagtg
gctgcaggattgggcctgtgctcattgattggaatttcctttaatgctgccacaactcag
gttttgccttttcttgctcttggagttggtgtagatgatgttttccttttggcacatgca
ttcagtgaaacagggcagaataagagaattccatttgaggacagaacaggtgaatgtttg
aagcgaacaggagcaagtgtagcccttacatctatcagcaatgttactgctttctttatg
gctgccttaatccctattcctgctttacgagcattttcactccaagcagcagttgtggtg
gtgttcaactttgctatggttctgctaatatttcctgctatcctgagcatggacctttat
cgtcgagaagacaggaggctggatatattctgctgtttcacaagtccttgtgtcactaga
gtgattcagattgagcctcaagcatatgcggaaaatgacaatacttgctacagtcctcca
cccccatacagcagtcacagttttgcacatgaaacccagattacaatgcagtctacagtg
cagttgcgcacagaatatgatccccatacgcaggtgtactacaccacagcagaaccacgc
tcagaaatatccgtacagcctgtgacagtgactcaagataatcttagctgccagagccca
gaaagcacaagctcgacgagggatttgctttcccaattttcagactccagtatgcattgt
cttgagccaccctgtacgaagtggacactctcaactttcgcagaaaaacattatgctccg
ttcctcctgaaaccaaaagctaagattgtggttatttttcttttcctgggtttacttggg
ctcagcctctatggaactacccgggtgagagatggactagatctcacagacattgtacca
cgggagacacgggaatatgactttattgccgcacagttcaagtacttttcattctacaac
atgtacattgtgacacagaaagcagactatccgaatgtccagcacttactctatgagctt
cacaaaagtttcagcaatgtgacatacgttttgttggaagaggatagacagcttcccaaa
atgtggttgcactactttcgagactggctgcaaggacttcaggatgcatttgacagcgac
tgggaaactgggaagatcacttacaataattataaaaacggatcagatgatgctgttctg
gcttacaaactcttggtacaaacaggcaacagagcaaagcccattgacatcagccagttg
actaaacagcgtctggtggatgcagatggaatcattaacccaaatgctttctacatctac
ctgacagcctgggttagcaatgaccctgtggcctatgctgcctctcaagccaacatccgg
cctcaccgcccagaatgggtccatgacaaagcagactatatgccagaaacaaggctgaga
attccagcagctgagcccatagaatacgctcagtttcctttctacctcaatggattgcgt
gaaacttctgactttgtggaagctatcgaaaaagtgagagctatctgtagtaactacacc
agcctggggatcgccagctacccaaatggttacccgtttctattttgggagcagtacatt
gggcttcgccactggctcctcttatccattagcgtggttttggcttgcacgtttctggtg
tgtgccctcttcctcctaaacccctggacggctgggatcattgtggtggtgctggctctg
atgactgtggagctgttcggcatgatgggtctaatcggaataaaactgagtgcagtgcct
gtggttatcctgattgcttctgttgggattggtgtggaattcactgttcatgttgctttg
gcatttttaactgccataggagacaagaaccatagggctgtccttgccctggaacatatg
tttgcaccagtgctggatggagctgtgtccactctgcttggagtgttaatgctcgcagga
tcagagtttgattttattgtcaggtatttctttgctgttttggcaatcttaaccattctg
ggagttctcaatggattggtgctgcttcctgttcttctttcattctttggaccgtaccct
gaggtttcaccagccaatggacgaaacagattacccacaccatctcctgagccacccccc
agcgttgtgaggtttgctctgccgcctgggcacacaaataatggatcagactcctctgac
tcagagtacagctctcaaaccaccgtgtcaggcatcagtgaagagctccatcattatgag
gctacccaaggtcctggggcaccagtccatcaagtagtagtggaagccactgagaatcct
gtctttgcgagatctactgtggttcagccagagacgaggcaccagtcaagtcccagatta
caatcgaacccggaggccggcacgcagcaggcgtggcgtcagggcaggcaacccaaacgg
gaagtgagggaagggctgcgaccacctccttaccgccctcgcagggacgcttttgaaatt
tctactgaagggcattcaggacccagcaatagggatcgcctgggccaccgggctcgttct
cataacatgagaagccccgcgttcggtgccatgggcacctcgggaccagcatactgccag
ccgatcactactgtgactgcctcagcttcagtgactgtcgctgtccaccctgctgtgcac
agccacagctctcggggaggaagctttccatcctatgaggggtaccatgaagctgaccat
gggatgttcgaggacccccatgtgccttttaatgtgcggtgtgaaagaagaaattctaaa
gtagaagttatagagcttcaagatgtcgaatgtgaggaaaggacagctggcaaaagctca
gtgtaa
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