Actinia tenebrosa (Australian red waratah sea anemone): 116304488
Help
Entry
116304488 CDS
T07455
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116304488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aten03019
]
116304488
Enzymes [BR:
aten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
116304488
Messenger RNA biogenesis [BR:
aten03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
116304488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
TniB
CbiA
MMR_HSR1
TPPII_C
AAA_24
ATP_bind_1
AAA_22
AAA_18
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
116304488
NCBI-ProteinID:
XP_031570089
UniProt:
A0A6P8ISY1
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MDVDEDRRQTEERQPWKLEKDSELRIEISEDSKGVNLVLLSGLAEVFGTELVKNKKFSFK
EGSKFAVFTWQGCSIEIIGPVEVAYISKETPMVMYLNFHMALEQMREKADKPENPELGPR
VMVVGPTDVGKSTVCRLLLNYAVRTGRRPVFVDLDVGQGTVGVPGSIGALLIERPADIEE
GFSLQAPLVYLFGHTSPAPNEKLYNKLTSKLADNVFKRFEKNKKAKASGCVINTCGWVTG
LGYRTLVHAAKEFKVNVIVVLDQERLYNDLKKQFSDQLQIVHLPKSGGVVVRSQETRRNV
RDERIRSYFYGQQGNLYPHSFEVKFADVKLFKIGAPVVPDSCLPLGMAQDDNQTKLVAVV
PSHDLKHCVLAVSAAESLNEDLVTTNVVGFLVVNNVDLDRQVMVVLSPAPRPLPRKFLIQ
SEVRFMDFK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgatgaagacagaagacagacagaggaaagacaaccatggaaactagaaaaa
gactcagaactccgtatagaaatctctgaggatagcaaaggagtgaaccttgtgctgttg
tcaggtcttgcggaagtctttggaacagagttagtcaagaataaaaagttttcgttcaaa
gaaggatcaaagtttgctgtttttacttggcaaggctgttctattgagattattggacct
gttgaggtagcctatatctccaaagagacaccaatggttatgtatctgaattttcacatg
gcactagagcaaatgagagaaaaggcagacaaaccagaaaacccagaacttggaccaagg
gtgatggtcgtaggtccaacagatgttgggaaatccactgtgtgtaggcttctattaaac
tacgctgtaagaacaggtagacggccagtgtttgttgacttggatgttggacagggcaca
gtaggtgttcctggttcaataggagctttactgattgagcgacctgctgacattgaagaa
ggattttccctgcaagcacctctggtatatctctttggtcatacttcaccagcaccaaat
gagaaactttacaataagctgacatctaaacttgctgataatgtcttcaaaagatttgag
aaaaacaaaaaggctaaagcaagtggctgtgtgataaacacctgtggttgggtgactgga
ttgggttacagaacattagttcatgccgccaaggaattcaaagtgaatgtaattgtggtt
ctggaccaagaaagattgtacaatgatctaaaaaagcaattttctgatcaactacaaata
gttcaccttcccaaatcaggaggggtcgtggtaagaagccaagaaacaagacgcaatgtt
agagatgaaagaataagaagttatttttatggacagcagggaaatctttatcctcactcc
tttgaagtaaagtttgctgatgttaaactttttaagattggagcccctgttgttccagat
tcatgtttgcctcttgggatggcacaagatgataaccagacaaagctagttgctgttgta
ccaagtcatgatttaaaacactgtgtactggcagtaagtgctgcagaatctttgaatgag
gaccttgtaactacaaatgtagtaggattccttgtcgtaaacaatgtggatcttgatcga
caagtcatggttgtattgtctccagctccaagacctcttcccaggaaatttctcattcaa
agtgaagtgagatttatggacttcaagtaa
DBGET
integrated database retrieval system
