Actinomyces urogenitalis: R3I39_07325
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Entry
R3I39_07325 CDS
T09523
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
auo
Actinomyces urogenitalis
Brite
KEGG Orthology (KO) [BR:
auo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auo03400
]
R3I39_07325
DNA repair and recombination proteins [BR:
auo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
R3I39_07325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
AAA_30
AAA_11
Zot
AAA_19
AAA_10
ResIII
FtsK_SpoIIIE
Hydrolase
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WOO94505
LinkDB
All DBs
Position
complement(1732438..1734324)
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AA seq
628 aa
AA seq
DB search
MTDASSTQPTDPAEVARLKAAAAQAAAEAAEAAAQAAEARAAAAQAALEAALASPAPSAP
EPSPDASPQDDPYAASVAAGYSFSGPVLPVGTYLSAPTASSGSPAAEPAAEPTAVPGVRV
GIPMGLLNRHALITGATGTGKTRTLQLMAEGLSAAGVPVFLSDVKGDLTGLAEPGTSSQR
LEARLASTAQQWAPQAFPVELFSLGGRGHGVPIRTTVTEFGPVMLARVLNLSETQTAALR
LVFRWADEQGLALVDLGDLRDVVTYLTTTDEGKAALRTIGGVSSATAGVILRQVTALEAD
GADRFFGEPALDVHELMRATADGRGVISALELDDVQSQGVLVSTFLMWLLGELFEELPEV
GDLERPRLVFFLDEAHLLFDGASPAFLEAVTHTVRLIRSKGVGIVLITQSATDLPTQVLA
QLGSRVQHAVRAHTPADAANLKKIVTTFPTSPLDLPTVLQTLGTGQAVVSVLDEKGRPAP
VAPVVVDAPASVMGPAQATTVSQILTGSTLLPRYAEPIDPDSASEALARRLVQAEQAREA
EKAAAQARAAQEKAEQERRKEAERAAAAQRKEAERLQREAEKAAERERRAAERAAERRQR
EIDKTLGSIGRQVTRELTRSILGNLRRR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacgcctcctccacccagcccactgatcctgctgaggtcgcccgtctcaaggcc
gcagccgcccaggctgctgctgaggctgccgaggctgcggcccaggccgccgaggcacgt
gctgcggccgcgcaggcagccttggaggcggcgcttgcctcgcccgcgccgagcgcgcct
gagccctcacctgatgcctcaccccaggacgatccctacgccgcctccgtggcagccggc
tactccttctccggccctgtgctgccggtcggcacctacctcagcgcgccgacggcgtcg
agcggctcccccgccgccgaacccgctgctgagcccaccgccgtgcccggggtacgggtt
ggtatccccatgggcctgctcaaccgccacgccctcatcacgggggccaccggcaccggc
aagacccgcacgctccagctcatggccgagggcctgtcagccgcgggcgtgcccgtcttc
ctctccgacgtcaagggagacctcacgggcctggccgagccaggtacctcctctcagcgc
ctggaggcccgcctggcttccaccgcgcagcagtgggcgccccaggccttccccgtggag
ctcttcagcctcggtggccggggccacggggtaccgatccgcaccacggtcacggagttc
ggccccgtcatgctcgcccgcgtgctgaacctgtccgagacccagaccgccgccctgcgc
ctggtcttccgctgggcggacgagcagggtctggccctggtggacctgggggacctgcgc
gacgtcgtgacctacctgactaccacggacgagggcaaggcggcactgcgcaccatcggt
ggggtgtcctcagccaccgcaggcgtcatcctgcgccaggtcaccgcgctggaggccgac
ggcgccgaccgcttcttcggtgagccggccctggacgtgcacgagctgatgcgcgccacc
gcggacgggcgcggcgtcatcagcgccctggagctcgacgacgtccagtcccagggcgtg
ctggtgtccaccttcctcatgtggctgctgggcgagctcttcgaggagctgcccgaggtc
ggggacctggagcgtccccggctggtcttcttcctcgacgaggcccacctgctcttcgac
ggcgcctcccccgccttcctggaggccgtcacccacaccgtgcgcctcatccgttccaag
ggcgtggggatcgtcctcatcacccagtcagccaccgaccttcccacccaggtgctcgcg
caactaggttcacgcgtccagcacgcggtgcgcgcccacacccctgcggacgcggccaac
ctgaaaaagatcgtgacgaccttccccacctccccgctggacctgcccacggtcctgcag
accctgggcaccggccaggccgtggtcagcgtgctggatgagaagggccgcccggcaccg
gtggcaccggtggtcgtggacgccccggcctcagtcatggggcccgcccaggcgaccacc
gtcagccagatcctcactggctccacgctgctgccccgctacgccgagcccatcgaccct
gactcggccagcgaggccctggcccgtcggctcgtccaggctgagcaggcacgcgaggcg
gagaaggccgcagcgcaggcccgtgcggcccaggagaaggctgagcaggagcgtcgcaag
gaggcggagcgagcggcagcggcccagcgtaaggaggcggagcgccttcagcgcgaggcg
gagaaggccgctgagcgtgagcgtcgcgctgccgagcgtgcggccgagcgccgtcagcgc
gagatcgacaagaccctgggtagcatcggccgccaggtcacccgggagctgacccgctcg
atcctgggcaacctgcgccggcgctga
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