Agrobacterium vitis VAT03-9: RvVAT039_05340
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Entry
RvVAT039_05340 CDS
T08809
Symbol
lpcC
Name
(GenBank) glycosyl transferase family 1
KO
K12989
mannosyltransferase [EC:2.4.1.-]
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
avv01005
]
RvVAT039_05340 (lpcC)
Lipopolysaccharide biosynthesis proteins [BR:
avv01005
]
Core region
RvVAT039_05340 (lpcC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
BCH63318
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Position
1:536651..537751
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AA seq
366 aa
AA seq
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MAKGTLCVLDPASILVVAPHFKRRLSGVTSTVVQLIPQQRRRGLAIATLGPGLPETMPAL
TFAQMPALWKKPLGASHRVWHARRNLEMLAGVVLRDVLRMPLKLLFTSAAQRHHSRYTRW
LISKMDAVVATSARSGSFLQVPHSVIRHGIDTELFHPPQGAEDRIAATNLPGDYLIGCFG
RVRHQKGTDLFVKAMIELLPRYPGWTAVVSGRVTPEHKGFAEGLKAQIAAASLTERIVFL
GEVEDIKPWYRRLTLYVAPSRNEGFGLTPLEAMASETVVVASDAGAYAELIAEGATGAVV
AADAYAPLRDAIEPYLADPGRACLHGKAAVAHVRENFALAREAAGLEAVYSRLLGRPVIA
PPAPQP
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggtaccctgtgcgtgcttgatcctgcttcaatccttgtggtggctcctcat
ttcaagcggcggctttcgggcgtaacctccaccgtggtgcaattgatcccgcagcagcgc
cgccgtgggctggccattgccacacttggtcccggcctgccggagaccatgcccgccctc
accttcgcacaaatgccagccttgtggaaaaagccgctcggcgcttcccatcgcgtctgg
catgcccggcgcaatctggaaatgctggcaggcgtggtgttgcgcgatgtgttgcgcatg
ccgctgaaactgctgtttacctcggcggcccagcgtcaccacagccgctatacccgttgg
ctgatctcgaaaatggatgccgtggtcgccaccagcgcccgctccggctcgtttttgcag
gtaccgcatagcgtcatccgccacggtatcgacaccgagctgtttcacccgccgcaaggt
gccgaggacaggatagcagccaccaacctgccgggcgattatctgatcggctgctttggt
cgggtgcgccatcaaaagggcaccgatctgttcgtcaaggcaatgatcgaacttctaccc
cgctatcccggctggacagccgtggtctccggccgcgtcaccccggaacataaaggcttt
gccgaggggctgaaggcgcagattgccgcggccagtctgacggagcggatcgtttttctg
ggcgaggtcgaggatatcaagccgtggtatcggcggctgacgctctatgtcgcaccctcg
cgcaatgaagggtttggcctgacgccactggaagccatggcgtccgaaaccgtggtggtc
gcatcggatgccggggcctatgcggaactgattgccgaaggggcaaccggcgccgtggtt
gccgccgatgcctatgcgccgctgcgtgatgcaatcgagccttatctggccgatcccggt
cgcgcctgcctgcatggcaaggctgccgttgcccatgtgcgggaaaatttcgcgcttgcc
agagaagcggcagggctggaggcggtctatagccgattgctcggcaggccggtcatcgcg
ccgcccgcgcctcaaccataa
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