Agrobacterium vitis VAT03-9: RvVAT039_13940
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Entry
RvVAT039_13940 CDS
T08809
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avv03036
]
RvVAT039_13940 (xerD)
Chromosome and associated proteins [BR:
avv03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RvVAT039_13940 (xerD)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
BCH64178
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All DBs
Position
1:1504828..1505826
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AA seq
332 aa
AA seq
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MVDLGHARIEAFLEMMSAERGAAGNTLSSYERDLEDLHGFLATRKVSVMAATSDDLSAYL
ADLSHRGFEASSQARRLSALRQFYKFLYAEGLRGDDPTSILDTPKKGRPLPKTLSIADVD
RLLSLAQAEAALEGPDRLQRLRRLALLELLYATGMRVSELVSLPANVLAQEGRFLVIRGK
GNKERLVPLSRSAIAAMQVYAQAKEIEQAEKPPSKKTASKQTESKLGKSSGIGFLFPAAS
REGYLPRQVFARELKDLAIRAGLSGDAVSPHVLRHAFASHLLENGADLRVVQELLGHSDI
STTQIYTHVLEERLQILVETHHPLAKHRKNHD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggttgatctcggccacgcccgcatcgaagctttccttgagatgatgagcgccgagcgc
ggtgcggcgggcaatacgctctcttcctatgaacgggatctggaagatttgcatggcttt
ctggccacgcgcaaagtcagcgtcatggccgccaccagcgacgacctgtccgcctatctg
gctgatcttagccatcgcggtttcgaagcctcgtcccaggcccgccgtctgtcggcgctt
cggcaattctacaagtttctctatgccgagggactgcgcggcgacgatccgacctcgatc
ctcgataccccgaaaaagggccggcctctgcccaagaccctgtcgattgccgatgtcgac
aggcttctatccctggcccaggccgaggcggcgttggaaggccccgaccgcctgcaaagg
ctgcggcgcctggcgctgctggagcttctctatgccacgggcatgcgtgtcagcgaactg
gtctcgcttccggccaatgtgcttgcgcaggagggcaggttcctggtgatccgcggcaag
ggcaacaaggagcggctggtaccgctgtcgcgctcggccatcgccgccatgcaggtttat
gcgcaggccaaggaaatcgaacaggcagaaaaaccaccatcgaaaaaaacagcgtcgaaa
caaacagagtcgaaactgggaaaatcatcgggcattggcttcctgtttccagccgccagc
cgtgaaggctatctgcccaggcaggttttcgcgcgggaattgaaagatttggccattcgc
gccggtctcagcggcgatgcggtgtcgccacatgtgctcaggcatgcttttgccagccat
ttgctcgaaaacggcgcggatctgcgtgttgtgcaggaattactgggacatagcgacatt
tcgacgacgcaaatctacacgcatgtgctcgaagaaaggctccagattctggttgagaca
catcaccctcttgcaaaacataggaaaaaccacgattag
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