Agrobacterium vitis VAT03-9: RvVAT039_14280
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Entry
RvVAT039_14280 CDS
T08809
Symbol
nuoF_1
Name
(GenBank) formate dehydrogenase subunit beta
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00630
Glyoxylate and dicarboxylate metabolism
avv00680
Methane metabolism
avv01100
Metabolic pathways
avv01120
Microbial metabolism in diverse environments
avv01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RvVAT039_14280 (nuoF_1)
09102 Energy metabolism
00680 Methane metabolism
RvVAT039_14280 (nuoF_1)
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GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
SLBB
Motif
Other DBs
NCBI-ProteinID:
BCH64212
UniProt:
A0AAD1N9P6
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Position
1:complement(1547817..1549385)
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AA seq
522 aa
AA seq
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MSGPMSITVFVPRDAAALAVGADKVAATIEREAAARHVDVTIIRNGSRGMLWLETLVEVR
TDHGRIAYGPVKPSDVAGLFDVGFLTGAAHPLCHGLTSDIPFLKNQTRLTFSRCGITDPL
SLEDYRHYKGLTGLSKAISMPPADIVAQVTESGLRGRGGAGFPTGIKWKTVADAKADQKY
IVCNADEGDSGTFADRMIMEGDPFVLIEGMVIAGIAVGATKGYVYTRSEYPHAIAVMREA
IEIARKHGILGASVLGSAYAFDMEVREGAGAYVCGEETSLLNSLEGKRGVVRAKPPLPAL
EGLFGKPTVVNNVMSLASVPVIMDRGAQFYRDYGVGRSHGTIPIQIAGNVKHGGLYETAF
GLTLGEIINDIGGGTLTDRPVKAVQVGGPLGAYFPPSLFDTVFDYEAFTAAGGLIGHAGI
VVFDDSADMLKQARFAMEFCAVESCGKCTPCRIGSTRGVETVDRIAKGIEPEKNKVLLED
LCNTMKFGSLCALGGFTPYPVMSAMTHFPQDFAPAPLVEAAE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggccgatgagtatcaccgtctttgttccccgtgatgccgctgctctggcggtc
ggcgctgataaggttgccgccaccatagagcgggaagctgcggcacgtcatgtcgatgtg
accatcatccgcaatgggtcgcggggtatgctctggctggaaaccctggtcgaagtgcgc
acggaccacggccggattgcctatggtcccgtcaagccttccgatgtcgctggcctgttc
gatgtcgggtttttgaccggggctgcccatcccctctgtcatggcttgaccagcgatatt
ccgttcctgaagaaccagacccggctgaccttttcccgctgcggcattaccgatccgctg
tcgttggaagattatcggcattacaagggtctgaccggcctctcaaaggcgatttccatg
ccgcccgccgacattgtcgcccaggtgaccgaaagcggccttcgcggtcgcggcggggcg
ggctttcctaccggcatcaaatggaaaaccgtggcggacgccaaagcggaccagaaatac
atcgtttgcaatgccgatgagggcgatagcggcacctttgccgaccggatgatcatggag
ggcgatcccttcgtgctgatcgaaggcatggtgattgccgggatcgcggtcggtgccacc
aagggctatgtctatacccgctcggaatatcctcatgccatcgccgtgatgcgtgaagcc
atcgagatcgcccgcaagcacggcattctgggtgcatccgtgttaggctctgcttacgct
tttgacatggaggtccgcgaaggggcgggcgcttatgtctgtggtgaggaaacctcgctg
ctcaacagcctggaaggcaagcgcggcgtggtacgggccaagccgccgcttccggcgctg
gaggggctgttcggtaagccaaccgttgtcaacaacgtcatgtcgctggcctccgttcct
gtcatcatggaccgcggcgcgcagttctaccgcgactacggcgttggccggtcgcatggc
accatcccgatccagattgctggcaatgtcaaacacggtggcctttacgagacggccttc
ggcctgacgctgggcgagatcatcaacgatatcggtggcggcaccctcacggaccgtccg
gtgaaggcggtgcaggtgggcgggccgctgggtgcctatttcccgccctcgctgtttgat
acggtgttcgactatgaagcctttaccgcagctggcggcttgatcggtcatgccgggatc
gttgtcttcgatgacagcgccgatatgctgaaacaggcgcggtttgccatggaattctgc
gcggtcgaaagctgcggcaagtgtacgccctgtcggattggttcgacgcgcggtgtcgaa
acggtggaccggatcgccaagggtatcgagcctgaaaagaacaaggtgctgctggaagat
ctctgcaacaccatgaaattcggatcgctttgcgcgcttggcggctttacgccctatcct
gtcatgagtgcgatgacccatttcccgcaggattttgcacctgcccccctcgttgaagcg
gcggagtaa
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