Agrobacterium vitis VAT03-9: RvVAT039_14390
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Entry
RvVAT039_14390 CDS
T08809
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RvVAT039_14390 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avv03400
]
RvVAT039_14390 (priA)
Enzymes [BR:
avv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RvVAT039_14390 (priA)
DNA repair and recombination proteins [BR:
avv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RvVAT039_14390 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
PriA_CRR
Helicase_C
zinc-ribbons_6
AAA_16
AAA_30
Mu-like_Com
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
BCH64223
LinkDB
All DBs
Position
1:complement(1558983..1561202)
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AA seq
739 aa
AA seq
DB search
MSTESSDLFGPRAKAGPARRAVPVLVPLPARGPYSYAVPDEMMLTPGAIVQVPLGPRKVV
GVVWDGEGDGAKVDPAKLRSIEKLFDCPPLDVGMRRFIDWVAAYTLSPPGLVARMALRAP
AAFDPDPMIEGLRYSGHAPEKLTPARRKVLELAEDGLSWTKSGLAHAAGVSTSVVDGMAK
LGLFETVFLPPPPLVALPDPDYAAHRLSGPQLGAAEVLVESVRDGGFSVALIDGVTGSGK
TEVYFEAIAETLRQGRQVLILLPEIALTTAFLERFQDRFGAKPGEWHSDLATRTREKVWR
QTATGDIRVVAGARSALFLPFADLGLIIVDEEHDPAFKQEDRVFYNARDMAVVRARIASI
PAVLVSATPSVESQVNSYSGRYKRIHLPTRFADAAMPDLHLVDMRRHPPERGGFLSPLML
RAIGKTVEKQQQALLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRGQIQCHQCGY
AEPTPNACPECGTLDHLVACGPGVERIAEEVERHFPDARTLVLSSDLGGVKRLRLELEAI
AKGEADIVIGTQLVAKGHNFPLMTLVGIVDADIGLANGDPRAAERTFQLLSQVTGRAGRT
GLKSHGLLQTYQPQHPVMQAIVSGDADAFYEREITERERAVLPPYGRLVSIIVSADNRAD
AETHARQLRQAAPAVGGIAILGPAEAPLALIRGRHRFRLLIHGRKASDMQAFVAAMLSNG
PKERRSIQVQVDVDPQSFL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaatcgtcagatctgtttggtccgcgcgccaaggccggtcctgcccgccgc
gccgtccccgtcctggtgcccttgccggcacgggggccttacagttacgccgttcccgat
gagatgatgctgacgccgggcgccatcgtgcaagtgccgcttgggccgcgcaaagtggtc
ggcgttgtctgggatggcgagggtgacggggccaaggtagatcccgccaaactgcgcagt
atcgaaaagctgttcgattgccctccgctggacgtgggcatgcgccggttcatcgactgg
gtggcggcctatactctttctccgcccggattggtggctcgcatggccttgcgtgcgcct
gccgctttcgatccggacccgatgatcgaaggcttgcgctacagcggtcatgccccggaa
aaactgaccccggcccgcaggaaagtgctggaattggctgaggacgggctttcctggacc
aagagcgggcttgcgcatgcggcaggggtctcgacctcggttgttgacggcatggcaaag
ctcggcctcttcgaaaccgtatttctaccgcctccacccttggtggcgctgccggacccg
gattacgccgcccatcgtctctccggtccgcagctgggcgcagctgaggtgctggtggag
agtgttcgggatggcgggttttcggtggcgctgatcgatggcgtcacagggtccggcaag
acggaagtctatttcgaagcgattgccgaaaccctgcgccagggccgccaggtgctgatc
cttctaccggaaatcgcgctgaccaccgcttttctggagcggtttcaggaccgttttggt
gccaagcccggcgaatggcattccgaccttgccacccggacgcgggaaaaagtctggcgg
cagacagcgacaggcgacatccgggtggtggccggtgcgcgctcggcgctttttctaccc
tttgccgatctggggctgatcattgtcgatgaggagcatgatccggccttcaagcaggaa
gacagggtgttctacaatgccagggacatggcggtggtgcgggcgcggattgccagcatt
cctgctgtgctggtgtcggccacgccgtcggttgaaagtcaggtcaacagttatagcggt
cgctacaagcgtattcacctgccgacccgttttgccgatgcggcgatgccggatctgcat
cttgtcgatatgcgccgccatccgccggaacggggcgggtttctttcgcctctcatgctg
cgggccatcggcaagacggtggaaaagcagcaacaggcactgttgtttctcaatcggcga
ggctatgcgccgctgacgctgtgccgggtctgtggccatcgtttccaatgcccgcaatgt
tccagttggctggtggaacaccggtttcgcggccagattcaatgtcatcaatgcggttat
gccgagccgacaccgaatgcttgtcccgaatgcgggacgctggaccatctcgttgcctgc
gggccgggcgtggagcggattgccgaggaggtggagcggcacttcccagacgctcgcacg
ctggtcttgtcgtcggatctcggcggcgtcaaacggctcaggctggaactggaagccatt
gccaagggcgaggcggatatcgtcatcggcacgcaattggtggccaaggggcataatttt
ccgctgatgacgcttgtcggtatcgttgatgccgatatcggcctggccaatggtgatccg
cgcgccgccgagcgaacctttcagctgttgagccaggtgacggggcgggcggggcgtacc
ggtttaaagagtcatggccttttgcagacctatcagccgcagcatccggtgatgcaagcc
attgtttccggcgatgccgatgccttttacgagcgggaaattaccgagcgggagcgggcg
gtgctgccgccttacgggcggcttgtctcgatcatcgtgtcggcggacaacagggcggat
gccgaaacccatgcgcggcaattgcgccaggccgcccctgctgtcggcggcatcgccatt
ctggggcctgccgaggcaccgctggcgctgatccgtggccgccatcgtttccgattgctc
attcatggccgcaaagccagcgacatgcaggcttttgtcgctgcgatgctgagcaatggc
ccgaaagagcgtcgctccatccaggtgcaagtggatgtcgatccgcagagctttctttga
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